Analysis of interatomic Contacts of Structural Units in PDB entry:
8GCN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GCN entry

There are 2 chains in PDB entry 8GCN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 876
B
 ALA 11VAL 53
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 8GCN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 10Right-handed alpha
Helix 2
AA2
A
14 32Right-handed alpha
Helix 3
AA3
A
32 46Right-handed alpha
Helix 4
AA4
A
50 66Right-handed alpha
Helix 5
AA5
A
69 82Right-handed alpha
Helix 6
AA6
A
84 99Right-handed alpha
Helix 7
AA7
A
107 124Right-handed alpha
Helix 8
AA8
A
128 139Right-handed alpha
Helix 9
AA9
A
143 161Right-handed alpha
Helix 10
AB1
A
162 167Right-handed 310
Helix 11
AB2
A
169 181Right-handed alpha
Helix 12
AB3
A
187 202Right-handed alpha
Helix 13
AB4
A
205 210Right-handed alpha
Helix 14
AB5
A
211 226Right-handed alpha
Helix 15
AB6
A
230 248Right-handed alpha
Helix 16
AB7
A
251 255Right-handed 310
Helix 17
AB8
A
259 270Right-handed alpha
Helix 18
AB9
A
272 304Right-handed alpha
Helix 19
AC1
A
313 330Right-handed alpha
Helix 20
AC2
A
343 360Right-handed alpha
Helix 21
AC3
A
363 375Right-handed alpha
Helix 22
AC4
A
379 393Right-handed alpha
Helix 23
AC5
A
398 418Right-handed alpha
Helix 24
AC6
A
421 439Right-handed alpha
Helix 25
AC7
A
439 444Right-handed alpha
Helix 26
AC8
A
445 460Right-handed alpha
Helix 27
AC9
A
463 486Right-handed alpha
Helix 28
AD1
A
498 501Right-handed 310
Helix 29
AD2
A
502 515Right-handed alpha
Helix 30
AD3
A
516 523Right-handed 310
Helix 31
AD4
A
524 538Right-handed alpha
Helix 32
AD5
A
540 542Right-handed 310
Helix 33
AD6
A
543 562Right-handed alpha
Helix 34
AD7
A
570 593Right-handed alpha
Helix 35
AD8
A
596 618Right-handed alpha
Helix 36
AD9
A
621 640Right-handed alpha
Helix 37
AE1
A
641 649Right-handed 310
Helix 38
AE2
A
650 659Right-handed alpha
Helix 39
AE3
A
663 682Right-handed alpha
Helix 40
AE4
A
685 702Right-handed alpha
Helix 41
AE5
A
709 725Right-handed alpha
Helix 42
AE6
A
728 745Right-handed alpha
Helix 43
AE7
A
751 778Right-handed alpha
Helix 44
AE8
A
784 792Right-handed 310
Helix 45
AE9
A
793 807Right-handed alpha
Helix 46
AF1
A
811 829Right-handed alpha
Helix 47
AF2
A
830 839Right-handed alpha
Helix 48
AF3
A
841 853Right-handed alpha
Helix 49
AF4
A
855 874Right-handed alpha
Helix 50
AF5
B
13 17Right-handed 310
Helix 51
AF6
B
23 52Right-handed alpha
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There are no sheets in PDB entry 8GCN
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