Analysis of interatomic Contacts of Structural Units in PDB entry:
8GE0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GE0 entry

There are 3 chains in PDB entry 8GE0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1HIS 188
B
 ALA 1SER 187
C
 ALA 1SER 187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8GE0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 53Right-handed alpha
Helix 2
AA2
A
64 69Right-handed alpha
Helix 3
AA3
A
97 103Right-handed alpha
Helix 4
AA4
A
119 123Right-handed 310
Helix 5
AA5
A
124 130Right-handed alpha
Helix 6
AA6
A
155 162Right-handed alpha
Helix 7
AA7
A
182 186Right-handed 310
Helix 8
AA8
B
49 53Right-handed alpha
Helix 9
AA9
B
64 69Right-handed alpha
Helix 10
AB1
B
97 103Right-handed alpha
Helix 11
AB2
B
119 123Right-handed 310
Helix 12
AB3
B
124 130Right-handed alpha
Helix 13
AB4
B
155 162Right-handed alpha
Helix 14
AB5
B
172 174Right-handed 310
Helix 15
AB6
B
182 186Right-handed 310
Helix 16
AB7
C
49 53Right-handed alpha
Helix 17
AB8
C
64 69Right-handed alpha
Helix 18
AB9
C
97 103Right-handed alpha
Helix 19
AC1
C
119 123Right-handed 310
Helix 20
AC2
C
124 130Right-handed alpha
Helix 21
AC3
C
155 163Right-handed alpha
Helix 22
AC4
C
182 186Right-handed 310
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There are 14 sheets in PDB entry 8GE0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
37 39anti-parallel
Strand 3
A
46 48anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
94 96anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
153 154anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 170first strand
Strand 2
A
176 181anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 39first strand
Strand 2
B
46 48anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 88first strand
Strand 2
B
93 96anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 110first strand
Strand 2
B
115 118anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 144first strand
Strand 2
B
153 154anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 170first strand
Strand 2
B
176 181anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 39first strand
Strand 2
C
46 48anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
85 88first strand
Strand 2
C
93 96anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
107 110first strand
Strand 2
C
115 118anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
143 144first strand
Strand 2
C
153 154anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
165 170first strand
Strand 2
C
176 181anti-parallel
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