Analysis of interatomic Contacts of Structural Units in PDB entry:
8GGK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GGK entry

There is 1 chain in PDB entry 8GGK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
 ASP 29CYS 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8GGK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
R
30 61Right-handed alpha
Helix 2
AA2
R
66 97Right-handed alpha
Helix 3
AA3
R
102 137Right-handed alpha
Helix 4
AA4
R
140 145Right-handed alpha
Helix 5
AA5
R
148 166Right-handed alpha
Helix 6
AA6
R
166 171Right-handed alpha
Helix 7
AA7
R
178 187Right-handed alpha
Helix 8
AA8
R
196 208Right-handed alpha
Helix 9
AA9
R
208 237Right-handed alpha
Helix 10
AB1
R
269 281Right-handed alpha
Helix 11
AB2
R
282 287Right-handed alpha
Helix 12
AB3
R
288 299Right-handed alpha
Helix 13
AB4
R
304 317Right-handed alpha
Helix 14
AB5
R
318 320Right-handed 310
Helix 15
AB6
R
321 327Right-handed alpha
Helix 16
AB7
R
329 340Right-handed alpha
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There are no sheets in PDB entry 8GGK
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il