Analysis of interatomic Contacts of Structural Units in PDB entry:
8GLR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GLR entry

There is 1 chain in PDB entry 8GLR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 12TYR 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8GLR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 34Right-handed alpha
Helix 2
AA2
A
43 45Right-handed 310
Helix 3
AA3
A
46 61Right-handed alpha
Helix 4
AA4
A
70 77Right-handed alpha
Helix 5
AA5
A
96 109Right-handed alpha
Helix 6
AA6
A
122 127Right-handed alpha
Helix 7
AA7
A
140 158Right-handed alpha
Helix 8
AA8
A
163 172Right-handed alpha
Helix 9
AA9
A
173 197Right-handed alpha
Helix 10
AB1
A
207 209Right-handed 310
Helix 11
AB2
A
210 221Right-handed alpha
Helix 12
AB3
A
221 227Right-handed alpha
Helix 13
AB4
A
235 239Right-handed alpha
Helix 14
AB5
A
240 246Right-handed 310
Helix 15
AB6
A
261 276Right-handed alpha
Helix 16
AB7
A
283 287Right-handed 310
Helix 17
AB8
A
293 295Right-handed 310
Helix 18
AB9
A
296 322Right-handed alpha
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There are 2 sheets in PDB entry 8GLR. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 69first strand
Strand 2
A
38 42parallel
Strand 3
A
86 90parallel
Strand 4
A
112 117parallel
Strand 5
A
130 133parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 234first strand
Strand 2
A
202 206parallel
Strand 3
A
252 255parallel
Strand 4
A
279 282parallel
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