Analysis of interatomic Contacts of Structural Units in PDB entry:
8GLU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8GLU entry

There are 4 chains in PDB entry 8GLU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	GLY 2	LEU 403
X	MET 1	LEU 310
F	ALA 3	VAL 405
E	THR 4	ALA 421

There are 83 helices in PDB entry 8GLU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	21	25	Right-handed 310
Helix 2	AA2	G	34	38	Right-handed 310
Helix 3	AA3	G	47	53	Right-handed 310
Helix 4	AA4	G	54	63	Right-handed alpha
Helix 5	AA5	G	75	89	Right-handed alpha
Helix 6	AA6	G	100	115	Right-handed alpha
Helix 7	AA7	G	141	150	Right-handed alpha
Helix 8	AA8	G	151	153	Right-handed 310
Helix 9	AA9	G	181	196	Right-handed alpha
Helix 10	AB1	G	209	224	Right-handed alpha
Helix 11	AB2	G	233	240	Right-handed 310
Helix 12	AB3	G	243	256	Right-handed alpha
Helix 13	AB4	G	268	270	Right-handed 310
Helix 14	AB5	G	271	276	Right-handed alpha
Helix 15	AB6	G	278	283	Right-handed alpha
Helix 16	AB7	G	305	316	Right-handed alpha
Helix 17	AB8	G	329	339	Right-handed alpha
Helix 18	AB9	G	343	362	Right-handed alpha
Helix 19	AC1	G	367	379	Right-handed alpha
Helix 20	AC2	G	382	392	Right-handed alpha
Helix 21	AC3	G	393	399	Right-handed alpha
Helix 22	AC4	X	12	24	Right-handed alpha
Helix 23	AC5	X	28	37	Right-handed alpha
Helix 24	AC6	X	53	59	Right-handed alpha
Helix 25	AC7	X	66	74	Right-handed alpha
Helix 26	AC8	X	76	85	Right-handed alpha
Helix 27	AC9	X	86	97	Right-handed alpha
Helix 28	AD1	X	100	108	Right-handed alpha
Helix 29	AD2	X	124	135	Right-handed alpha
Helix 30	AD3	X	164	168	Right-handed 310
Helix 31	AD4	X	189	200	Right-handed alpha
Helix 32	AD5	X	201	203	Right-handed 310
Helix 33	AD6	X	205	211	Right-handed 310
Helix 34	AD7	X	214	230	Right-handed alpha
Helix 35	AD8	X	240	250	Right-handed alpha
Helix 36	AD9	X	251	258	Right-handed alpha
Helix 37	AE1	X	269	276	Right-handed alpha
Helix 38	AE2	X	283	295	Right-handed alpha
Helix 39	AE3	X	299	310	Right-handed alpha
Helix 40	AE4	F	21	26	Right-handed alpha
Helix 41	AE5	F	33	37	Right-handed 310
Helix 42	AE6	F	55	63	Right-handed alpha
Helix 43	AE7	F	75	90	Right-handed alpha
Helix 44	AE8	F	100	115	Right-handed alpha
Helix 45	AE9	F	143	151	Right-handed alpha
Helix 46	AF1	F	179	195	Right-handed alpha
Helix 47	AF2	F	209	222	Right-handed alpha
Helix 48	AF3	F	233	238	Right-handed 310
Helix 49	AF4	F	246	259	Right-handed alpha
Helix 50	AF5	F	268	270	Right-handed 310
Helix 51	AF6	F	271	276	Right-handed alpha
Helix 52	AF7	F	278	286	Right-handed alpha
Helix 53	AF8	F	305	316	Right-handed alpha
Helix 54	AF9	F	317	319	Right-handed 310
Helix 55	AG1	F	329	341	Right-handed alpha
Helix 56	AG2	F	344	362	Right-handed alpha
Helix 57	AG3	F	367	379	Right-handed alpha
Helix 58	AG4	F	382	392	Right-handed alpha
Helix 59	AG5	F	393	399	Right-handed alpha
Helix 60	AG6	E	15	19	Right-handed 310
Helix 61	AG7	E	21	27	Right-handed alpha
Helix 62	AG8	E	32	39	Right-handed alpha
Helix 63	AG9	E	47	51	Right-handed 310
Helix 64	AH1	E	54	64	Right-handed alpha
Helix 65	AH2	E	64	69	Right-handed alpha
Helix 66	AH3	E	75	90	Right-handed alpha
Helix 67	AH4	E	100	113	Right-handed alpha
Helix 68	AH5	E	143	151	Right-handed alpha
Helix 69	AH6	E	181	195	Right-handed alpha
Helix 70	AH7	E	198	203	Right-handed alpha
Helix 71	AH8	E	209	224	Right-handed alpha
Helix 72	AH9	E	233	237	Right-handed 310
Helix 73	AI1	E	246	255	Right-handed alpha
Helix 74	AI2	E	268	270	Right-handed 310
Helix 75	AI3	E	271	276	Right-handed alpha
Helix 76	AI4	E	278	285	Right-handed alpha
Helix 77	AI5	E	305	317	Right-handed alpha
Helix 78	AI6	E	329	341	Right-handed alpha
Helix 79	AI7	E	343	361	Right-handed alpha
Helix 80	AI8	E	367	379	Right-handed alpha
Helix 81	AI9	E	382	392	Right-handed alpha
Helix 82	AJ1	E	393	400	Right-handed alpha
Helix 83	AJ2	E	407	421	Right-handed alpha

There are 8 sheets in PDB entry 8GLU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	6	7	first strand
Strand 2	G	156	158	parallel
Strand 3	G	165	167	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	173	first strand
Strand 2	G	228	232	parallel
Strand 3	G	263	267	parallel
Strand 4	G	131	136	parallel
Strand 5	G	290	293	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	7	first strand
Strand 2	F	156	158	parallel
Strand 3	F	165	167	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	171	173	first strand
Strand 2	F	229	232	parallel
Strand 3	F	263	267	parallel
Strand 4	F	132	135	parallel
Strand 5	F	290	292	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	299	300	first strand
Strand 2	F	303	304	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	7	first strand
Strand 2	E	156	158	parallel
Strand 3	E	165	167	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	133	first strand
Strand 2	E	263	265	parallel
Strand 3	E	229	232	parallel
Strand 4	E	171	173	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	136	first strand
Strand 2	E	292	293	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8GLU

Analysis of interatomic Contacts of Structural Units in PDB entry:
8GLU