Analysis of interatomic Contacts of Structural Units in PDB entry:
8GMR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GMR entry

There are 8 chains in PDB entry 8GMR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 30ASN 255
A
 ALA 30ASN 255
C
 ALA 30ASN 255
D
 ALA 30ASN 255
E
 ALA 30ASN 255
F
 ALA 30ASN 255
G
 ALA 30ASN 255
H
 ALA 30ASN 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are128 helices in PDB entry 8GMR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
33 38Right-handed alpha
Helix 2
AA2
B
48 69Right-handed alpha
Helix 3
AA3
B
75 81Right-handed alpha
Helix 4
AA4
B
82 84Right-handed 310
Helix 5
AA5
B
100 107Right-handed alpha
Helix 6
AA6
B
109 115Right-handed alpha
Helix 7
AA7
B
115 122Right-handed alpha
Helix 8
AA8
B
122 127Right-handed alpha
Helix 9
AA9
B
128 133Right-handed 310
Helix 10
AB1
B
148 157Right-handed alpha
Helix 11
AB2
B
172 177Right-handed alpha
Helix 12
AB3
B
179 197Right-handed alpha
Helix 13
AB4
B
198 201Right-handed 310
Helix 14
AB5
B
213 219Right-handed alpha
Helix 15
AB6
B
222 247Right-handed alpha
Helix 16
AB7
B
248 251Right-handed 310
Helix 17
AB8
A
33 38Right-handed alpha
Helix 18
AB9
A
48 69Right-handed alpha
Helix 19
AC1
A
75 81Right-handed alpha
Helix 20
AC2
A
82 84Right-handed 310
Helix 21
AC3
A
100 107Right-handed alpha
Helix 22
AC4
A
109 115Right-handed alpha
Helix 23
AC5
A
115 122Right-handed alpha
Helix 24
AC6
A
122 127Right-handed alpha
Helix 25
AC7
A
128 133Right-handed 310
Helix 26
AC8
A
148 157Right-handed alpha
Helix 27
AC9
A
172 177Right-handed alpha
Helix 28
AD1
A
179 197Right-handed alpha
Helix 29
AD2
A
198 201Right-handed 310
Helix 30
AD3
A
213 219Right-handed alpha
Helix 31
AD4
A
222 247Right-handed alpha
Helix 32
AD5
A
248 251Right-handed 310
Helix 33
AD6
C
33 38Right-handed alpha
Helix 34
AD7
C
48 69Right-handed alpha
Helix 35
AD8
C
75 81Right-handed alpha
Helix 36
AD9
C
82 84Right-handed 310
Helix 37
AE1
C
100 107Right-handed alpha
Helix 38
AE2
C
109 115Right-handed alpha
Helix 39
AE3
C
115 122Right-handed alpha
Helix 40
AE4
C
122 127Right-handed alpha
Helix 41
AE5
C
128 133Right-handed 310
Helix 42
AE6
C
148 157Right-handed alpha
Helix 43
AE7
C
172 177Right-handed alpha
Helix 44
AE8
C
179 197Right-handed alpha
Helix 45
AE9
C
198 201Right-handed 310
Helix 46
AF1
C
213 219Right-handed alpha
Helix 47
AF2
C
222 247Right-handed alpha
Helix 48
AF3
C
248 251Right-handed 310
Helix 49
AF4
D
33 38Right-handed alpha
Helix 50
AF5
D
48 69Right-handed alpha
Helix 51
AF6
D
75 81Right-handed alpha
Helix 52
AF7
D
82 84Right-handed 310
Helix 53
AF8
D
100 107Right-handed alpha
Helix 54
AF9
D
109 115Right-handed alpha
Helix 55
AG1
D
115 122Right-handed alpha
Helix 56
AG2
D
122 127Right-handed alpha
Helix 57
AG3
D
128 133Right-handed 310
Helix 58
AG4
D
148 157Right-handed alpha
Helix 59
AG5
D
172 177Right-handed alpha
Helix 60
AG6
D
179 197Right-handed alpha
Helix 61
AG7
D
198 201Right-handed 310
Helix 62
AG8
D
213 219Right-handed alpha
Helix 63
AG9
D
222 247Right-handed alpha
Helix 64
AH1
D
248 251Right-handed 310
Helix 65
AH2
E
33 38Right-handed alpha
Helix 66
AH3
E
48 69Right-handed alpha
Helix 67
AH4
E
75 81Right-handed alpha
Helix 68
AH5
E
82 84Right-handed 310
Helix 69
AH6
E
100 107Right-handed alpha
Helix 70
AH7
E
109 115Right-handed alpha
Helix 71
AH8
E
115 122Right-handed alpha
Helix 72
AH9
E
122 127Right-handed alpha
Helix 73
AI1
E
128 133Right-handed 310
Helix 74
AI2
E
148 157Right-handed alpha
Helix 75
AI3
E
172 177Right-handed alpha
Helix 76
AI4
E
179 197Right-handed alpha
Helix 77
AI5
E
198 201Right-handed 310
Helix 78
AI6
E
213 219Right-handed alpha
Helix 79
AI7
E
222 247Right-handed alpha
Helix 80
AI8
E
248 251Right-handed 310
Helix 81
AI9
F
33 38Right-handed alpha
Helix 82
AJ1
F
48 69Right-handed alpha
Helix 83
AJ2
F
75 81Right-handed alpha
Helix 84
AJ3
F
82 84Right-handed 310
Helix 85
AJ4
F
100 107Right-handed alpha
Helix 86
AJ5
F
109 115Right-handed alpha
Helix 87
AJ6
F
115 122Right-handed alpha
Helix 88
AJ7
F
122 127Right-handed alpha
Helix 89
AJ8
F
128 133Right-handed 310
Helix 90
AJ9
F
148 157Right-handed alpha
Helix 91
AK1
F
172 177Right-handed alpha
Helix 92
AK2
F
179 197Right-handed alpha
Helix 93
AK3
F
198 201Right-handed 310
Helix 94
AK4
F
213 219Right-handed alpha
Helix 95
AK5
F
222 247Right-handed alpha
Helix 96
AK6
F
248 251Right-handed 310
Helix 97
AK7
G
33 38Right-handed alpha
Helix 98
AK8
G
48 69Right-handed alpha
Helix 99
AK9
G
75 81Right-handed alpha
Helix 100
AL1
G
82 84Right-handed 310
Helix 101
AL2
G
100 107Right-handed alpha
Helix 102
AL3
G
109 115Right-handed alpha
Helix 103
AL4
G
115 122Right-handed alpha
Helix 104
AL5
G
122 127Right-handed alpha
Helix 105
AL6
G
128 133Right-handed 310
Helix 106
AL7
G
148 157Right-handed alpha
Helix 107
AL8
G
172 177Right-handed alpha
Helix 108
AL9
G
179 197Right-handed alpha
Helix 109
AM1
G
198 201Right-handed 310
Helix 110
AM2
G
213 219Right-handed alpha
Helix 111
AM3
G
222 247Right-handed alpha
Helix 112
AM4
G
248 251Right-handed 310
Helix 113
AM5
H
33 38Right-handed alpha
Helix 114
AM6
H
48 69Right-handed alpha
Helix 115
AM7
H
75 81Right-handed alpha
Helix 116
AM8
H
82 84Right-handed 310
Helix 117
AM9
H
100 107Right-handed alpha
Helix 118
AN1
H
109 115Right-handed alpha
Helix 119
AN2
H
115 122Right-handed alpha
Helix 120
AN3
H
122 127Right-handed alpha
Helix 121
AN4
H
128 133Right-handed 310
Helix 122
AN5
H
148 157Right-handed alpha
Helix 123
AN6
H
172 177Right-handed alpha
Helix 124
AN7
H
179 197Right-handed alpha
Helix 125
AN8
H
198 201Right-handed 310
Helix 126
AN9
H
213 219Right-handed alpha
Helix 127
AO1
H
222 247Right-handed alpha
Helix 128
AO2
H
248 251Right-handed 310
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There are no sheets in PDB entry 8GMR
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