Analysis of interatomic Contacts of Structural Units in PDB entry:
8GR5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GR5 entry

There is 1 chain in PDB entry 8GR5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5LEU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8GR5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 17Right-handed 310
Helix 2
AA2
A
26 40Right-handed alpha
Helix 3
AA3
A
56 65Right-handed alpha
Helix 4
AA4
A
69 92Right-handed alpha
Helix 5
AA5
A
94 111Right-handed alpha
Helix 6
AA6
A
118 135Right-handed alpha
Helix 7
AA7
A
136 164Right-handed alpha
Helix 8
AA8
A
168 180Right-handed alpha
Helix 9
AA9
A
181 187Right-handed alpha
Helix 10
AB1
A
188 194Right-handed alpha
Helix 11
AB2
A
198 203Right-handed alpha
Helix 12
AB3
A
204 233Right-handed alpha
Helix 13
AB4
A
239 249Right-handed alpha
Helix 14
AB5
A
251 275Right-handed alpha
Helix 15
AB6
A
281 309Right-handed alpha
Helix 16
AB7
A
316 324Right-handed alpha
Helix 17
AB8
A
328 336Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8GR5.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
325 327anti-parallel
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