Analysis of interatomic Contacts of Structural Units in PDB entry:
8GSZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GSZ entry

There are 2 chains in PDB entry 8GSZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3GLU 337
B
 HIS 3GLU 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8GSZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 31Right-handed alpha
Helix 2
AA2
A
32 38Right-handed alpha
Helix 3
AA3
A
44 65Right-handed alpha
Helix 4
AA4
A
65 72Right-handed alpha
Helix 5
AA5
A
72 78Right-handed alpha
Helix 6
AA6
A
80 90Right-handed alpha
Helix 7
AA7
A
91 108Right-handed alpha
Helix 8
AA8
A
117 134Right-handed alpha
Helix 9
AA9
A
140 151Right-handed alpha
Helix 10
AB1
A
156 167Right-handed alpha
Helix 11
AB2
A
174 186Right-handed alpha
Helix 12
AB3
A
262 273Right-handed alpha
Helix 13
AB4
A
283 288Right-handed alpha
Helix 14
AB5
A
290 302Right-handed alpha
Helix 15
AB6
A
302 307Right-handed alpha
Helix 16
AB7
A
324 335Right-handed alpha
Helix 17
AB8
B
16 31Right-handed alpha
Helix 18
AB9
B
32 38Right-handed alpha
Helix 19
AC1
B
44 65Right-handed alpha
Helix 20
AC2
B
65 72Right-handed alpha
Helix 21
AC3
B
72 78Right-handed alpha
Helix 22
AC4
B
80 90Right-handed alpha
Helix 23
AC5
B
91 108Right-handed alpha
Helix 24
AC6
B
117 134Right-handed alpha
Helix 25
AC7
B
140 151Right-handed alpha
Helix 26
AC8
B
156 167Right-handed alpha
Helix 27
AC9
B
174 186Right-handed alpha
Helix 28
AD1
B
262 273Right-handed alpha
Helix 29
AD2
B
283 288Right-handed alpha
Helix 30
AD3
B
290 302Right-handed alpha
Helix 31
AD4
B
302 307Right-handed alpha
Helix 32
AD5
B
324 335Right-handed alpha
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There are 2 sheets in PDB entry 8GSZ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 249first strand
Strand 2
A
252 260anti-parallel
Strand 3
A
198 201parallel
Strand 4
A
309 312parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
244 249first strand
Strand 2
B
252 260anti-parallel
Strand 3
B
198 201parallel
Strand 4
B
309 312parallel
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