Analysis of interatomic Contacts of Structural Units in PDB entry:
8GUO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GUO entry

There are 2 chains in PDB entry 8GUO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 161
B
 LEU 470LYS 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 8GUO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 20Right-handed alpha
Helix 2
AA2
A
59 64Right-handed alpha
Helix 3
AA3
A
67 92Right-handed alpha
Helix 4
AA4
A
119 123Right-handed 310
Helix 5
AA5
A
125 138Right-handed alpha
Helix 6
AA6
A
144 160Right-handed alpha
Helix 7
AA7
B
558 573Right-handed alpha
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There are 2 sheets in PDB entry 8GUO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
39 46anti-parallel
Strand 3
A
28 36anti-parallel
Strand 4
A
99 105anti-parallel
Strand 5
A
110 115anti-parallel
Strand 6
B
492 497anti-parallel
Strand 7
B
483 486anti-parallel
Strand 8
B
475 477anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
39 46anti-parallel
Strand 3
B
606 613anti-parallel
Strand 4
B
594 601anti-parallel
Strand 5
B
578 585anti-parallel
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