Analysis of interatomic Contacts of Structural Units in PDB entry:
8GUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GUU entry

There are 2 chains in PDB entry 8GUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 34SER 216
A
 ARG 218LYS 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 8GUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 49Right-handed alpha
Helix 2
AA2
A
50 68Right-handed alpha
Helix 3
AA3
A
79 89Right-handed alpha
Helix 4
AA4
A
104 107Right-handed 310
Helix 5
AA5
A
119 123Right-handed 310
Helix 6
AA6
A
150 154Right-handed 310
Helix 7
AA7
A
158 162Right-handed 310
Helix 8
AA8
A
192 196Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8GUU.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 103first strand
Strand 2
A
108 113anti-parallel
Strand 3
A
125 127parallel
Strand 4
A
140 145anti-parallel
Strand 5
A
202 210parallel
Strand 6
A
217 226anti-parallel
Strand 7
A
175 187anti-parallel
Strand 8
A
167 172anti-parallel
Strand 9
A
97 103anti-parallel
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