Analysis of interatomic Contacts of Structural Units in PDB entry:
8GW6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GW6 entry

There are 3 chains in PDB entry 8GW6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 150LYS 516
B
 ASN 150LYS 516
C
 ASN 150LYS 516
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 8GW6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
184 188Right-handed 310
Helix 2
AA2
A
189 192Right-handed 310
Helix 3
AA3
A
193 212Right-handed alpha
Helix 4
AA4
A
222 259Right-handed alpha
Helix 5
AA5
A
262 267Right-handed 310
Helix 6
AA6
A
268 280Right-handed alpha
Helix 7
AA7
A
293 314Right-handed alpha
Helix 8
AA8
A
328 334Right-handed 310
Helix 9
AA9
A
335 347Right-handed alpha
Helix 10
AB1
A
351 371Right-handed alpha
Helix 11
AB2
A
372 374Right-handed 310
Helix 12
AB3
A
387 393Right-handed 310
Helix 13
AB4
A
394 408Right-handed alpha
Helix 14
AB5
A
412 431Right-handed alpha
Helix 15
AB6
A
442 449Right-handed alpha
Helix 16
AB7
A
449 466Right-handed alpha
Helix 17
AB8
A
468 499Right-handed alpha
Helix 18
AB9
A
507 511Right-handed 310
Helix 19
AC1
B
184 188Right-handed 310
Helix 20
AC2
B
189 192Right-handed 310
Helix 21
AC3
B
193 212Right-handed alpha
Helix 22
AC4
B
222 259Right-handed alpha
Helix 23
AC5
B
262 267Right-handed 310
Helix 24
AC6
B
268 280Right-handed alpha
Helix 25
AC7
B
293 314Right-handed alpha
Helix 26
AC8
B
328 334Right-handed 310
Helix 27
AC9
B
335 347Right-handed alpha
Helix 28
AD1
B
351 371Right-handed alpha
Helix 29
AD2
B
372 374Right-handed 310
Helix 30
AD3
B
387 393Right-handed 310
Helix 31
AD4
B
394 408Right-handed alpha
Helix 32
AD5
B
412 431Right-handed alpha
Helix 33
AD6
B
442 449Right-handed alpha
Helix 34
AD7
B
449 466Right-handed alpha
Helix 35
AD8
B
468 499Right-handed alpha
Helix 36
AD9
B
507 511Right-handed 310
Helix 37
AE1
C
184 188Right-handed 310
Helix 38
AE2
C
189 192Right-handed 310
Helix 39
AE3
C
193 212Right-handed alpha
Helix 40
AE4
C
222 259Right-handed alpha
Helix 41
AE5
C
262 267Right-handed 310
Helix 42
AE6
C
268 280Right-handed alpha
Helix 43
AE7
C
293 314Right-handed alpha
Helix 44
AE8
C
328 334Right-handed 310
Helix 45
AE9
C
335 347Right-handed alpha
Helix 46
AF1
C
351 371Right-handed alpha
Helix 47
AF2
C
372 374Right-handed 310
Helix 48
AF3
C
387 393Right-handed 310
Helix 49
AF4
C
394 408Right-handed alpha
Helix 50
AF5
C
412 431Right-handed alpha
Helix 51
AF6
C
442 449Right-handed alpha
Helix 52
AF7
C
449 466Right-handed alpha
Helix 53
AF8
C
468 499Right-handed alpha
Helix 54
AF9
C
507 511Right-handed 310
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There are no sheets in PDB entry 8GW6
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il