Analysis of interatomic Contacts of Structural Units in PDB entry:
8GWG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8GWG entry

There are 9 chains in PDB entry 8GWG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 4	LEU 931
B	PHE 6	ASN 192
C	LYS 2	GLU 73
D	PHE 6	ALA 191
E	VAL 2	PRO 593
F	VAL 2	PRO 593
G	ASN 1	GLN 113
I	G 11	G 35
J	A 100	C 126

There are104 helices in PDB entry 8GWG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	13	Right-handed alpha
Helix 2	AA2	A	61	63	Right-handed 310
Helix 3	AA3	A	76	91	Right-handed alpha
Helix 4	AA4	A	123	133	Right-handed alpha
Helix 5	AA5	A	135	138	Right-handed 310
Helix 6	AA6	A	139	149	Right-handed alpha
Helix 7	AA7	A	153	159	Right-handed 310
Helix 8	AA8	A	170	177	Right-handed alpha
Helix 9	AA9	A	178	199	Right-handed alpha
Helix 10	AB1	A	236	242	Right-handed alpha
Helix 11	AB2	A	243	245	Right-handed 310
Helix 12	AB3	A	276	287	Right-handed alpha
Helix 13	AB4	A	297	301	Right-handed 310
Helix 14	AB5	A	303	315	Right-handed alpha
Helix 15	AB6	A	367	376	Right-handed alpha
Helix 16	AB7	A	378	383	Right-handed alpha
Helix 17	AB8	A	416	426	Right-handed alpha
Helix 18	AB9	A	449	454	Right-handed alpha
Helix 19	AC1	A	455	459	Right-handed 310
Helix 20	AC2	A	465	479	Right-handed alpha
Helix 21	AC3	A	489	493	Right-handed 310
Helix 22	AC4	A	505	509	Right-handed 310
Helix 23	AC5	A	511	518	Right-handed alpha
Helix 24	AC6	A	522	531	Right-handed alpha
Helix 25	AC7	A	561	580	Right-handed alpha
Helix 26	AC8	A	597	606	Right-handed alpha
Helix 27	AC9	A	621	626	Right-handed alpha
Helix 28	AD1	A	627	639	Right-handed alpha
Helix 29	AD2	A	648	663	Right-handed alpha
Helix 30	AD3	A	686	709	Right-handed alpha
Helix 31	AD4	A	717	732	Right-handed alpha
Helix 32	AD5	A	738	752	Right-handed alpha
Helix 33	AD6	A	768	772	Right-handed alpha
Helix 34	AD7	A	778	789	Right-handed alpha
Helix 35	AD8	A	833	842	Right-handed alpha
Helix 36	AD9	A	847	851	Right-handed 310
Helix 37	AE1	A	856	866	Right-handed alpha
Helix 38	AE2	A	867	872	Right-handed 310
Helix 39	AE3	A	874	903	Right-handed alpha
Helix 40	AE4	A	912	916	Right-handed 310
Helix 41	AE5	A	917	923	Right-handed alpha
Helix 42	AE6	A	924	926	Right-handed 310
Helix 43	AE7	B	9	29	Right-handed alpha
Helix 44	AE8	B	31	43	Right-handed alpha
Helix 45	AE9	B	44	52	Right-handed alpha
Helix 46	AF1	B	55	95	Right-handed alpha
Helix 47	AF2	B	96	98	Right-handed 310
Helix 48	AF3	B	100	109	Right-handed alpha
Helix 49	AF4	B	116	118	Right-handed 310
Helix 50	AF5	B	119	125	Right-handed alpha
Helix 51	AF6	B	134	142	Right-handed alpha
Helix 52	AF7	B	176	180	Right-handed 310
Helix 53	AF8	C	3	20	Right-handed alpha
Helix 54	AF9	C	21	24	Right-handed 310
Helix 55	AG1	C	25	41	Right-handed alpha
Helix 56	AG2	C	44	62	Right-handed alpha
Helix 57	AG3	C	66	71	Right-handed alpha
Helix 58	AG4	D	9	29	Right-handed alpha
Helix 59	AG5	D	33	41	Right-handed alpha
Helix 60	AG6	D	51	80	Right-handed alpha
Helix 61	AG7	D	82	99	Right-handed alpha
Helix 62	AG8	D	100	113	Right-handed alpha
Helix 63	AG9	D	135	141	Right-handed alpha
Helix 64	AH1	D	176	180	Right-handed 310
Helix 65	AH2	E	26	37	Right-handed alpha
Helix 66	AH3	E	103	111	Right-handed alpha
Helix 67	AH4	E	116	126	Right-handed alpha
Helix 68	AH5	E	127	147	Right-handed alpha
Helix 69	AH6	E	259	261	Right-handed 310
Helix 70	AH7	E	262	273	Right-handed alpha
Helix 71	AH8	E	287	299	Right-handed alpha
Helix 72	AH9	E	310	320	Right-handed alpha
Helix 73	AI1	E	320	325	Right-handed alpha
Helix 74	AI2	E	326	328	Right-handed 310
Helix 75	AI3	E	380	391	Right-handed alpha
Helix 76	AI4	E	418	422	Right-handed 310
Helix 77	AI5	E	424	429	Right-handed alpha
Helix 78	AI6	E	445	454	Right-handed alpha
Helix 79	AI7	E	489	494	Right-handed alpha
Helix 80	AI8	E	495	503	Right-handed alpha
Helix 81	AI9	E	505	509	Right-handed 310
Helix 82	AJ1	E	515	526	Right-handed alpha
Helix 83	AJ2	E	557	567	Right-handed alpha
Helix 84	AJ3	F	26	36	Right-handed alpha
Helix 85	AJ4	F	103	112	Right-handed alpha
Helix 86	AJ5	F	116	126	Right-handed alpha
Helix 87	AJ6	F	127	147	Right-handed alpha
Helix 88	AJ7	F	259	261	Right-handed 310
Helix 89	AJ8	F	262	273	Right-handed alpha
Helix 90	AJ9	F	287	299	Right-handed alpha
Helix 91	AK1	F	310	320	Right-handed alpha
Helix 92	AK2	F	320	325	Right-handed alpha
Helix 93	AK3	F	326	328	Right-handed 310
Helix 94	AK4	F	380	391	Right-handed alpha
Helix 95	AK5	F	418	422	Right-handed 310
Helix 96	AK6	F	424	429	Right-handed alpha
Helix 97	AK7	F	445	454	Right-handed alpha
Helix 98	AK8	F	489	494	Right-handed alpha
Helix 99	AK9	F	495	503	Right-handed alpha
Helix 100	AL1	F	505	509	Right-handed 310
Helix 101	AL2	F	515	526	Right-handed alpha
Helix 102	AL3	F	532	536	Right-handed 310
Helix 103	AL4	F	557	567	Right-handed alpha
Helix 104	AL5	G	95	110	Right-handed alpha

There are 27 sheets in PDB entry 8GWG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	21	first strand
Strand 2	A	56	59	anti-parallel
Strand 3	A	65	69	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	73	first strand
Strand 2	A	112	115	anti-parallel
Strand 3	A	101	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	224	first strand
Strand 2	A	201	204	anti-parallel
Strand 3	A	231	233	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	327	328	first strand
Strand 2	A	345	347	anti-parallel
Strand 3	A	353	355	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	334	335	first strand
Strand 2	A	338	339	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	399	400	first strand
Strand 2	A	386	390	anti-parallel
Strand 3	B	127	132	parallel
Strand 4	B	184	190	anti-parallel
Strand 5	B	154	160	anti-parallel
Strand 6	B	146	147	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	415	first strand
Strand 2	A	843	844	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	559	first strand
Strand 2	A	539	544	anti-parallel
Strand 3	A	666	669	parallel
Strand 4	A	672	673	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	612	617	first strand
Strand 2	A	762	767	anti-parallel
Strand 3	A	753	757	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	816	822	first strand
Strand 2	A	825	831	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	132	first strand
Strand 2	D	184	190	anti-parallel
Strand 3	D	152	158	anti-parallel
Strand 4	D	146	149	anti-parallel
Strand 5	D	142	143	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	4	first strand
Strand 2	E	11	12	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	24	25	first strand
Strand 2	E	14	16	anti-parallel
Strand 3	E	42	43	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	70	71	first strand
Strand 2	E	64	65	anti-parallel
Strand 3	E	81	82	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	84	85	first strand
Strand 2	E	88	89	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	165	166	first strand
Strand 2	E	152	154	anti-parallel
Strand 3	E	224	226	anti-parallel
Strand 4	E	183	187	anti-parallel
Strand 5	E	192	196	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	162	163	first strand
Strand 2	E	209	213	anti-parallel
Strand 3	E	198	201	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	347	348	first strand
Strand 2	E	330	333	parallel
Strand 3	E	355	359	parallel
Strand 4	E	304	308	parallel
Strand 5	E	370	374	parallel
Strand 6	E	395	398	parallel
Strand 7	E	277	281	parallel
Strand 8	E	436	437	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	510	512	first strand
Strand 2	E	543	546	parallel
Strand 3	E	571	576	parallel
Strand 4	E	472	475	parallel
Strand 5	E	588	589	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	4	first strand
Strand 2	F	11	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	15	first strand
Strand 2	F	24	25	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	70	71	first strand
Strand 2	F	64	65	anti-parallel
Strand 3	F	81	82	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	84	85	first strand
Strand 2	F	88	89	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	192	196	first strand
Strand 2	F	183	187	anti-parallel
Strand 3	F	224	226	anti-parallel
Strand 4	F	152	159	anti-parallel
Strand 5	F	162	166	anti-parallel
Strand 6	F	209	213	anti-parallel
Strand 7	F	198	201	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	330	333	first strand
Strand 2	F	355	359	parallel
Strand 3	F	304	308	parallel
Strand 4	F	370	374	parallel
Strand 5	F	395	398	parallel
Strand 6	F	277	281	parallel
Strand 7	F	436	437	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	510	512	first strand
Strand 2	F	543	547	parallel
Strand 3	F	571	576	parallel
Strand 4	F	472	475	parallel
Strand 5	F	588	589	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	17	first strand
Strand 2	G	26	35	anti-parallel
Strand 3	G	38	46	anti-parallel
Strand 4	G	84	91	anti-parallel
Strand 5	G	64	77	anti-parallel
Strand 6	G	53	57	anti-parallel
Strand 7	G	11	17	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8GWG

Analysis of interatomic Contacts of Structural Units in PDB entry:
8GWG