Analysis of interatomic Contacts of Structural Units in PDB entry:
8GXN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GXN entry

There is 1 chain in PDB entry 8GXN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 8ILE 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8GXN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
13 25Right-handed alpha
Helix 2
AA2
B
26 29Right-handed 310
Helix 3
AA3
B
30 45Right-handed alpha
Helix 4
AA4
B
46 51Right-handed 310
Helix 5
AA5
B
53 67Right-handed alpha
Helix 6
AA6
B
80 90Right-handed alpha
Helix 7
AA7
B
102 116Right-handed alpha
Helix 8
AA8
B
118 120Right-handed 310
Helix 9
AA9
B
128 137Right-handed alpha
Helix 10
AB1
B
155 157Right-handed 310
Helix 11
AB2
B
158 169Right-handed alpha
Helix 12
AB3
B
182 186Right-handed 310
Helix 13
AB4
B
194 201Right-handed alpha
Helix 14
AB5
B
201 214Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8GXN.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 126first strand
Strand 2
B
95 100parallel
Strand 3
B
71 75parallel
Strand 4
B
147 152parallel
Strand 5
B
170 178parallel
Strand 6
B
229 234anti-parallel
Strand 7
B
218 223anti-parallel
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