Analysis of interatomic Contacts of Structural Units in PDB entry:
8GXO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GXO entry

There are 2 chains in PDB entry 8GXO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 8LEU 236
B
 LYS 8LEU 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8GXO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 25Right-handed alpha
Helix 2
AA2
A
26 29Right-handed 310
Helix 3
AA3
A
30 45Right-handed alpha
Helix 4
AA4
A
46 51Right-handed 310
Helix 5
AA5
A
53 67Right-handed alpha
Helix 6
AA6
A
80 90Right-handed alpha
Helix 7
AA7
A
102 116Right-handed alpha
Helix 8
AA8
A
118 120Right-handed 310
Helix 9
AA9
A
128 139Right-handed alpha
Helix 10
AB1
A
155 157Right-handed 310
Helix 11
AB2
A
158 169Right-handed alpha
Helix 12
AB3
A
182 186Right-handed 310
Helix 13
AB4
A
195 197Right-handed 310
Helix 14
AB5
A
198 214Right-handed alpha
Helix 15
AB6
B
13 25Right-handed alpha
Helix 16
AB7
B
26 29Right-handed 310
Helix 17
AB8
B
30 45Right-handed alpha
Helix 18
AB9
B
46 51Right-handed 310
Helix 19
AC1
B
53 68Right-handed alpha
Helix 20
AC2
B
80 90Right-handed alpha
Helix 21
AC3
B
102 116Right-handed alpha
Helix 22
AC4
B
118 120Right-handed 310
Helix 23
AC5
B
128 139Right-handed alpha
Helix 24
AC6
B
140 143Right-handed 310
Helix 25
AC7
B
155 157Right-handed 310
Helix 26
AC8
B
158 169Right-handed alpha
Helix 27
AC9
B
203 214Right-handed alpha
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There are 2 sheets in PDB entry 8GXO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 125first strand
Strand 2
A
95 99parallel
Strand 3
A
71 75parallel
Strand 4
A
147 152parallel
Strand 5
A
170 179parallel
Strand 6
A
229 234anti-parallel
Strand 7
A
218 223anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 125first strand
Strand 2
B
95 99parallel
Strand 3
B
71 75parallel
Strand 4
B
147 152parallel
Strand 5
B
170 179parallel
Strand 6
B
229 234anti-parallel
Strand 7
B
218 223anti-parallel
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