Analysis of interatomic Contacts of Structural Units in PDB entry:
8GY0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GY0 entry

There are 2 chains in PDB entry 8GY0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ILE 5GLN 318
A
 ILE 5GLN 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8GY0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
27 37Right-handed alpha
Helix 2
AA2
B
44 53Right-handed alpha
Helix 3
AA3
B
53 62Right-handed alpha
Helix 4
AA4
B
66 87Right-handed alpha
Helix 5
AA5
B
91 108Right-handed alpha
Helix 6
AA6
B
115 133Right-handed alpha
Helix 7
AA7
B
135 157Right-handed alpha
Helix 8
AA8
B
167 179Right-handed alpha
Helix 9
AA9
B
180 189Right-handed alpha
Helix 10
AB1
B
195 200Right-handed alpha
Helix 11
AB2
B
201 230Right-handed alpha
Helix 12
AB3
B
236 246Right-handed alpha
Helix 13
AB4
B
248 273Right-handed alpha
Helix 14
AB5
B
278 308Right-handed alpha
Helix 15
AB6
A
27 36Right-handed alpha
Helix 16
AB7
A
44 53Right-handed alpha
Helix 17
AB8
A
53 62Right-handed alpha
Helix 18
AB9
A
66 87Right-handed alpha
Helix 19
AC1
A
91 108Right-handed alpha
Helix 20
AC2
A
115 133Right-handed alpha
Helix 21
AC3
A
135 160Right-handed alpha
Helix 22
AC4
A
167 179Right-handed alpha
Helix 23
AC5
A
180 189Right-handed alpha
Helix 24
AC6
A
195 200Right-handed alpha
Helix 25
AC7
A
201 229Right-handed alpha
Helix 26
AC8
A
236 246Right-handed alpha
Helix 27
AC9
A
248 273Right-handed alpha
Helix 28
AD1
A
278 308Right-handed alpha
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There are no sheets in PDB entry 8GY0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il