Analysis of interatomic Contacts of Structural Units in PDB entry:
8GYC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GYC entry

There are 2 chains in PDB entry 8GYC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3CYS 321
B
 GLN 3CYS 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 8GYC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 29Right-handed alpha
Helix 2
AA2
A
34 45Right-handed alpha
Helix 3
AA3
A
46 62Right-handed alpha
Helix 4
AA4
A
64 73Right-handed alpha
Helix 5
AA5
A
74 86Right-handed alpha
Helix 6
AA6
A
87 100Right-handed alpha
Helix 7
AA7
A
101 105Right-handed 310
Helix 8
AA8
A
106 117Right-handed alpha
Helix 9
AA9
A
118 134Right-handed alpha
Helix 10
AB1
A
136 145Right-handed alpha
Helix 11
AB2
A
146 158Right-handed alpha
Helix 12
AB3
A
168 185Right-handed alpha
Helix 13
AB4
A
190 201Right-handed alpha
Helix 14
AB5
A
202 218Right-handed alpha
Helix 15
AB6
A
220 225Right-handed 310
Helix 16
AB7
A
231 246Right-handed alpha
Helix 17
AB8
A
246 260Right-handed alpha
Helix 18
AB9
A
265 276Right-handed alpha
Helix 19
AC1
A
280 293Right-handed alpha
Helix 20
AC2
A
295 304Right-handed alpha
Helix 21
AC3
A
305 317Right-handed alpha
Helix 22
AC4
B
16 29Right-handed alpha
Helix 23
AC5
B
34 45Right-handed alpha
Helix 24
AC6
B
46 62Right-handed alpha
Helix 25
AC7
B
64 73Right-handed alpha
Helix 26
AC8
B
74 86Right-handed alpha
Helix 27
AC9
B
87 100Right-handed alpha
Helix 28
AD1
B
101 105Right-handed 310
Helix 29
AD2
B
106 117Right-handed alpha
Helix 30
AD3
B
118 134Right-handed alpha
Helix 31
AD4
B
136 145Right-handed alpha
Helix 32
AD5
B
146 158Right-handed alpha
Helix 33
AD6
B
168 185Right-handed alpha
Helix 34
AD7
B
190 201Right-handed alpha
Helix 35
AD8
B
202 218Right-handed alpha
Helix 36
AD9
B
220 225Right-handed 310
Helix 37
AE1
B
231 246Right-handed alpha
Helix 38
AE2
B
246 260Right-handed alpha
Helix 39
AE3
B
265 276Right-handed alpha
Helix 40
AE4
B
280 293Right-handed alpha
Helix 41
AE5
B
295 304Right-handed alpha
Helix 42
AE6
B
305 317Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8GYC.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 321first strand
Strand 2
B
319 320anti-parallel
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