Analysis of interatomic Contacts of Structural Units in PDB entry:
8GYZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GYZ entry

There are 2 chains in PDB entry 8GYZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 149TRP 360
B
 GLY 151GLN 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8GYZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
149 177Right-handed alpha
Helix 2
AA2
A
182 218Right-handed alpha
Helix 3
AA3
A
222 228Right-handed alpha
Helix 4
AA4
A
235 244Right-handed alpha
Helix 5
AA5
A
245 248Right-handed 310
Helix 6
AA6
A
251 294Right-handed alpha
Helix 7
AA7
A
301 311Right-handed alpha
Helix 8
AA8
A
311 334Right-handed alpha
Helix 9
AA9
A
335 355Right-handed alpha
Helix 10
AB1
B
152 177Right-handed alpha
Helix 11
AB2
B
182 218Right-handed alpha
Helix 12
AB3
B
222 228Right-handed alpha
Helix 13
AB4
B
235 244Right-handed alpha
Helix 14
AB5
B
245 248Right-handed 310
Helix 15
AB6
B
251 294Right-handed alpha
Helix 16
AB7
B
301 311Right-handed alpha
Helix 17
AB8
B
311 334Right-handed alpha
Helix 18
AB9
B
335 362Right-handed alpha
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There are no sheets in PDB entry 8GYZ
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