Analysis of interatomic Contacts of Structural Units in PDB entry:
8H0N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H0N entry

There are 2 chains in PDB entry 8H0N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 283GLY 629
B
 TYR 7HIS 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8H0N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
510 513Right-handed 310
Helix 2
AA2
A
610 623Right-handed alpha
Helix 3
AA3
A
624 627Right-handed 310
Helix 4
AA4
B
10 14Right-handed 310
Helix 5
AA5
B
15 19Right-handed 310
Helix 6
AA6
B
59 66Right-handed alpha
Helix 7
AA7
B
85 97Right-handed alpha
Helix 8
AA8
B
115 120Right-handed alpha
Helix 9
AA9
B
136 140Right-handed 310
Helix 10
AB1
B
141 145Right-handed 310
Helix 11
AB2
B
148 158Right-handed alpha
Helix 12
AB3
B
171 185Right-handed alpha
Helix 13
AB4
B
192 197Right-handed 310
Helix 14
AB5
B
201 205Right-handed 310
Helix 15
AB6
B
209 219Right-handed alpha
Helix 16
AB7
B
232 242Right-handed alpha
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There are 8 sheets in PDB entry 8H0N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 290first strand
Strand 2
A
293 298anti-parallel
Strand 3
A
301 306anti-parallel
Strand 4
A
315 319anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 349first strand
Strand 2
A
355 360anti-parallel
Strand 3
A
364 369anti-parallel
Strand 4
A
374 380anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 390first strand
Strand 2
A
396 401anti-parallel
Strand 3
A
405 410anti-parallel
Strand 4
A
419 423anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 433first strand
Strand 2
A
439 444anti-parallel
Strand 3
A
449 453anti-parallel
Strand 4
A
456 464anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 476first strand
Strand 2
A
483 488anti-parallel
Strand 3
A
492 497anti-parallel
Strand 4
A
502 508anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
526 532first strand
Strand 2
A
537 542anti-parallel
Strand 3
A
547 554anti-parallel
Strand 4
A
559 567anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
572 578first strand
Strand 2
A
582 587anti-parallel
Strand 3
A
594 600anti-parallel
Strand 4
A
603 606anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 111first strand
Strand 2
B
73 78parallel
Strand 3
B
49 54parallel
Strand 4
B
125 131parallel
Strand 5
B
159 169parallel
Strand 6
B
223 229anti-parallel
Strand 7
B
188 191anti-parallel
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