Analysis of interatomic Contacts of Structural Units in PDB entry:
8H0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H0P entry

There are 6 chains in PDB entry 8H0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 ASN 22GLY 31
R
 GLU 39GLY 342
A
 LEU 11VAL 359
B
 GLU 8ASN 345
E
 VAL 1LEU 247
G
 THR 5ASN 58
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8H0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
L
22 26Right-handed 310
Helix 2
AA2
R
40 70Right-handed alpha
Helix 3
AA3
R
79 106Right-handed alpha
Helix 4
AA4
R
112 147Right-handed alpha
Helix 5
AA5
R
156 174Right-handed alpha
Helix 6
AA6
R
176 181Right-handed alpha
Helix 7
AA7
R
206 221Right-handed alpha
Helix 8
AA8
R
221 244Right-handed alpha
Helix 9
AA9
R
256 292Right-handed alpha
Helix 10
AB1
R
299 314Right-handed alpha
Helix 11
AB2
R
315 328Right-handed alpha
Helix 12
AB3
R
329 342Right-handed alpha
Helix 13
AB4
A
12 38Right-handed alpha
Helix 14
AB5
A
51 59Right-handed alpha
Helix 15
AB6
A
215 221Right-handed 310
Helix 16
AB7
A
247 260Right-handed alpha
Helix 17
AB8
A
275 285Right-handed alpha
Helix 18
AB9
A
292 296Right-handed 310
Helix 19
AC1
A
308 319Right-handed alpha
Helix 20
AC2
A
335 356Right-handed alpha
Helix 21
AC3
B
9 31Right-handed alpha
Helix 22
AC4
B
34 39Right-handed alpha
Helix 23
AC5
E
27 31Right-handed 310
Helix 24
AC6
E
52 55Right-handed 310
Helix 25
AC7
G
6 22Right-handed alpha
Helix 26
AC8
G
28 44Right-handed alpha
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There are 14 sheets in PDB entry 8H0P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
183 186first strand
Strand 2
R
196 199anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 195first strand
Strand 2
A
200 205anti-parallel
Strand 3
A
40 46parallel
Strand 4
A
225 231parallel
Strand 5
A
268 274parallel
Strand 6
A
327 328parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 56first strand
Strand 2
B
341 345anti-parallel
Strand 3
B
332 336anti-parallel
Strand 4
B
320 325anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 68first strand
Strand 2
B
74 79anti-parallel
Strand 3
B
83 88anti-parallel
Strand 4
B
93 99anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 110first strand
Strand 2
B
116 121anti-parallel
Strand 3
B
125 130anti-parallel
Strand 4
B
139 145anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 156first strand
Strand 2
B
161 165anti-parallel
Strand 3
B
171 175anti-parallel
Strand 4
B
181 184anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 207first strand
Strand 2
B
213 217anti-parallel
Strand 3
B
223 227anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 239first strand
Strand 2
B
245 250anti-parallel
Strand 3
B
255 259anti-parallel
Strand 4
B
264 269anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 283first strand
Strand 2
B
289 294anti-parallel
Strand 3
B
299 303anti-parallel
Strand 4
B
309 313anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 6first strand
Strand 2
E
16 23anti-parallel
Strand 3
E
77 83anti-parallel
Strand 4
E
67 72anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 11first strand
Strand 2
E
114 118parallel
Strand 3
E
91 98anti-parallel
Strand 4
E
32 38anti-parallel
Strand 5
E
44 50anti-parallel
Strand 6
E
57 59anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 11first strand
Strand 2
E
114 118parallel
Strand 3
E
91 98anti-parallel
Strand 4
E
109 110anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
140 141first strand
Strand 2
E
155 161anti-parallel
Strand 3
E
211 216anti-parallel
Strand 4
E
203 207anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
186 187first strand
Strand 2
E
175 179anti-parallel
Strand 3
E
226 230anti-parallel
Strand 4
E
243 244anti-parallel
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