Analysis of interatomic Contacts of Structural Units in PDB entry:
8H1B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H1B entry

There are 4 chains in PDB entry 8H1B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 189
B
 MET 1HIS 193
C
 A 27 U 43
D
 A 27 U 43
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8H1B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 16Right-handed alpha
Helix 2
AA2
A
32 42Right-handed alpha
Helix 3
AA3
A
53 64Right-handed alpha
Helix 4
AA4
A
76 83Right-handed 310
Helix 5
AA5
A
85 89Right-handed 310
Helix 6
AA6
A
112 126Right-handed alpha
Helix 7
AA7
A
141 157Right-handed alpha
Helix 8
AA8
B
5 16Right-handed alpha
Helix 9
AA9
B
32 42Right-handed alpha
Helix 10
AB1
B
53 65Right-handed alpha
Helix 11
AB2
B
76 83Right-handed 310
Helix 12
AB3
B
85 89Right-handed 310
Helix 13
AB4
B
112 126Right-handed alpha
Helix 14
AB5
B
141 157Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8H1B.

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 74first strand
Strand 2
A
46 51parallel
Strand 3
A
23 26parallel
Strand 4
A
92 98parallel
Strand 5
A
127 137parallel
Strand 6
A
179 185anti-parallel
Strand 7
A
163 170anti-parallel
Strand 8
B
163 170anti-parallel
Strand 9
B
179 185anti-parallel
Strand 10
B
127 137anti-parallel
Strand 11
B
92 98parallel
Strand 12
B
23 26parallel
Strand 13
B
46 51parallel
Strand 14
B
70 74parallel
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