Analysis of interatomic Contacts of Structural Units in PDB entry:
8H1L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H1L entry

There are 3 chains in PDB entry 8H1L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 423
B	MET 1	VAL 423
C	THR 2	TRP 381

There are 62 helices in PDB entry 8H1L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	20	Right-handed alpha
Helix 2	AA2	A	20	27	Right-handed alpha
Helix 3	AA3	A	55	71	Right-handed alpha
Helix 4	AA4	A	73	75	Right-handed 310
Helix 5	AA5	A	76	94	Right-handed alpha
Helix 6	AA6	A	118	136	Right-handed alpha
Helix 7	AA7	A	138	155	Right-handed alpha
Helix 8	AA8	A	176	180	Right-handed 310
Helix 9	AA9	A	186	204	Right-handed alpha
Helix 10	AB1	A	205	223	Right-handed alpha
Helix 11	AB2	A	270	289	Right-handed alpha
Helix 12	AB3	A	291	294	Right-handed 310
Helix 13	AB4	A	295	310	Right-handed alpha
Helix 14	AB5	A	335	353	Right-handed alpha
Helix 15	AB6	A	355	371	Right-handed alpha
Helix 16	AB7	A	402	423	Right-handed alpha
Helix 17	AB8	B	2	20	Right-handed alpha
Helix 18	AB9	B	20	27	Right-handed alpha
Helix 19	AC1	B	55	71	Right-handed alpha
Helix 20	AC2	B	73	75	Right-handed 310
Helix 21	AC3	B	76	94	Right-handed alpha
Helix 22	AC4	B	118	136	Right-handed alpha
Helix 23	AC5	B	138	155	Right-handed alpha
Helix 24	AC6	B	176	180	Right-handed 310
Helix 25	AC7	B	186	204	Right-handed alpha
Helix 26	AC8	B	205	223	Right-handed alpha
Helix 27	AC9	B	270	289	Right-handed alpha
Helix 28	AD1	B	291	294	Right-handed 310
Helix 29	AD2	B	295	310	Right-handed alpha
Helix 30	AD3	B	335	353	Right-handed alpha
Helix 31	AD4	B	354	371	Right-handed alpha
Helix 32	AD5	B	402	422	Right-handed alpha
Helix 33	AD6	C	3	20	Right-handed alpha
Helix 34	AD7	C	20	27	Right-handed alpha
Helix 35	AD8	C	55	71	Right-handed alpha
Helix 36	AD9	C	76	94	Right-handed alpha
Helix 37	AE1	C	118	136	Right-handed alpha
Helix 38	AE2	C	138	155	Right-handed alpha
Helix 39	AE3	C	176	180	Right-handed 310
Helix 40	AE4	C	186	204	Right-handed alpha
Helix 41	AE5	C	205	223	Right-handed alpha
Helix 42	AE6	C	270	288	Right-handed alpha
Helix 43	AE7	C	291	294	Right-handed 310
Helix 44	AE8	C	295	310	Right-handed alpha
Helix 45	AE9	C	335	353	Right-handed alpha
Helix 46	AF1	C	355	371	Right-handed alpha
Helix 47	AF2	C	402	423	Right-handed alpha
Helix 48	AF3	D	3	20	Right-handed alpha
Helix 49	AF4	D	20	27	Right-handed alpha
Helix 50	AF5	D	55	71	Right-handed alpha
Helix 51	AF6	D	76	94	Right-handed alpha
Helix 52	AF7	D	118	136	Right-handed alpha
Helix 53	AF8	D	138	155	Right-handed alpha
Helix 54	AF9	D	176	180	Right-handed 310
Helix 55	AG1	D	186	204	Right-handed alpha
Helix 56	AG2	D	205	223	Right-handed alpha
Helix 57	AG3	D	270	289	Right-handed alpha
Helix 58	AG4	D	291	294	Right-handed 310
Helix 59	AG5	D	295	310	Right-handed alpha
Helix 60	AG6	D	335	353	Right-handed alpha
Helix 61	AG7	D	355	371	Right-handed alpha
Helix 62	AG8	D	402	422	Right-handed alpha

There are 20 sheets in PDB entry 8H1L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	104	105	anti-parallel
Strand 3	A	111	113	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	117	first strand
Strand 2	A	166	167	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	183	185	first strand
Strand 2	A	234	236	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	268	269	first strand
Strand 2	A	321	323	anti-parallel
Strand 3	A	328	330	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	333	334	first strand
Strand 2	A	383	384	anti-parallel
Strand 3	A	390	392	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	104	105	anti-parallel
Strand 3	B	111	113	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	117	first strand
Strand 2	B	166	167	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	183	185	first strand
Strand 2	B	234	236	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	321	322	first strand
Strand 2	B	328	330	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	333	334	first strand
Strand 2	B	383	384	anti-parallel
Strand 3	B	390	392	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	104	105	anti-parallel
Strand 3	C	111	113	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	117	first strand
Strand 2	C	166	167	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	183	185	first strand
Strand 2	C	234	236	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	321	322	first strand
Strand 2	C	328	330	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	333	334	first strand
Strand 2	C	383	384	anti-parallel
Strand 3	C	390	392	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	54	first strand
Strand 2	D	104	105	anti-parallel
Strand 3	D	111	113	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	116	117	first strand
Strand 2	D	166	167	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	183	185	first strand
Strand 2	D	234	236	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	268	269	first strand
Strand 2	D	321	323	anti-parallel
Strand 3	D	328	330	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	333	334	first strand
Strand 2	D	383	384	anti-parallel
Strand 3	D	390	392	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H1L

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H1L