Analysis of interatomic Contacts of Structural Units in PDB entry:
8H24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H24 entry

There is 1 chain in PDB entry 8H24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 39GLN 347
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 8H24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
156 161Right-handed 310
Helix 2
AA2
A
304 306Right-handed 310
Helix 3
AA3
A
307 317Right-handed alpha
Helix 4
AA4
A
318 321Right-handed 310
Helix 5
AA5
A
323 327Right-handed 310
Helix 6
AA6
A
332 336Right-handed 310
Helix 7
AA7
A
339 346Right-handed alpha
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There are 3 sheets in PDB entry 8H24. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
52 56anti-parallel
Strand 3
A
70 75parallel
Strand 4
A
96 98parallel
Strand 5
A
120 122parallel
Strand 6
A
144 146parallel
Strand 7
A
168 170parallel
Strand 8
A
192 194parallel
Strand 9
A
216 218parallel
Strand 10
A
240 242parallel
Strand 11
A
264 266parallel
Strand 12
A
293 295parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
250 251parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
329 331parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il