Analysis of interatomic Contacts of Structural Units in PDB entry:
8H2B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H2B entry

There are 4 chains in PDB entry 8H2B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	PHE 371
B	SER 2	PHE 371
C	SER 0	PHE 371
D	SER 2	PHE 371

There are 78 helices in PDB entry 8H2B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	41	48	Right-handed alpha
Helix 2	AA2	A	91	96	Right-handed alpha
Helix 3	AA3	A	97	102	Right-handed 310
Helix 4	AA4	A	121	123	Right-handed 310
Helix 5	AA5	A	136	138	Right-handed 310
Helix 6	AA6	A	161	167	Right-handed alpha
Helix 7	AA7	A	170	181	Right-handed alpha
Helix 8	AA8	A	199	210	Right-handed alpha
Helix 9	AA9	A	221	231	Right-handed alpha
Helix 10	AB1	A	243	245	Right-handed 310
Helix 11	AB2	A	246	257	Right-handed alpha
Helix 12	AB3	A	271	275	Right-handed 310
Helix 13	AB4	A	276	281	Right-handed alpha
Helix 14	AB5	A	303	306	Right-handed 310
Helix 15	AB6	A	315	319	Right-handed 310
Helix 16	AB7	A	320	334	Right-handed alpha
Helix 17	AB8	A	338	342	Right-handed alpha
Helix 18	AB9	A	348	350	Right-handed 310
Helix 19	AC1	A	351	361	Right-handed alpha
Helix 20	AC2	B	41	47	Right-handed alpha
Helix 21	AC3	B	48	50	Right-handed 310
Helix 22	AC4	B	91	96	Right-handed alpha
Helix 23	AC5	B	98	102	Right-handed 310
Helix 24	AC6	B	121	123	Right-handed 310
Helix 25	AC7	B	136	138	Right-handed 310
Helix 26	AC8	B	161	167	Right-handed alpha
Helix 27	AC9	B	170	181	Right-handed alpha
Helix 28	AD1	B	199	211	Right-handed alpha
Helix 29	AD2	B	221	231	Right-handed alpha
Helix 30	AD3	B	243	245	Right-handed 310
Helix 31	AD4	B	246	257	Right-handed alpha
Helix 32	AD5	B	271	275	Right-handed 310
Helix 33	AD6	B	276	281	Right-handed alpha
Helix 34	AD7	B	303	306	Right-handed 310
Helix 35	AD8	B	315	319	Right-handed 310
Helix 36	AD9	B	320	334	Right-handed alpha
Helix 37	AE1	B	338	342	Right-handed alpha
Helix 38	AE2	B	348	350	Right-handed 310
Helix 39	AE3	B	351	361	Right-handed alpha
Helix 40	AE4	C	41	47	Right-handed alpha
Helix 41	AE5	C	48	50	Right-handed 310
Helix 42	AE6	C	91	96	Right-handed alpha
Helix 43	AE7	C	97	102	Right-handed 310
Helix 44	AE8	C	121	123	Right-handed 310
Helix 45	AE9	C	136	138	Right-handed 310
Helix 46	AF1	C	161	167	Right-handed alpha
Helix 47	AF2	C	170	181	Right-handed alpha
Helix 48	AF3	C	199	211	Right-handed alpha
Helix 49	AF4	C	221	232	Right-handed alpha
Helix 50	AF5	C	243	245	Right-handed 310
Helix 51	AF6	C	246	257	Right-handed alpha
Helix 52	AF7	C	271	275	Right-handed 310
Helix 53	AF8	C	276	281	Right-handed alpha
Helix 54	AF9	C	303	306	Right-handed 310
Helix 55	AG1	C	315	319	Right-handed 310
Helix 56	AG2	C	320	334	Right-handed alpha
Helix 57	AG3	C	338	342	Right-handed alpha
Helix 58	AG4	C	348	350	Right-handed 310
Helix 59	AG5	C	351	361	Right-handed alpha
Helix 60	AG6	D	41	47	Right-handed alpha
Helix 61	AG7	D	91	96	Right-handed alpha
Helix 62	AG8	D	97	102	Right-handed 310
Helix 63	AG9	D	121	123	Right-handed 310
Helix 64	AH1	D	136	138	Right-handed 310
Helix 65	AH2	D	161	167	Right-handed alpha
Helix 66	AH3	D	170	181	Right-handed alpha
Helix 67	AH4	D	197	211	Right-handed alpha
Helix 68	AH5	D	221	232	Right-handed alpha
Helix 69	AH6	D	243	245	Right-handed 310
Helix 70	AH7	D	246	258	Right-handed alpha
Helix 71	AH8	D	271	275	Right-handed 310
Helix 72	AH9	D	276	281	Right-handed alpha
Helix 73	AI1	D	303	306	Right-handed 310
Helix 74	AI2	D	315	319	Right-handed 310
Helix 75	AI3	D	320	334	Right-handed alpha
Helix 76	AI4	D	338	342	Right-handed alpha
Helix 77	AI5	D	348	350	Right-handed 310
Helix 78	AI6	D	351	361	Right-handed alpha

There are 16 sheets in PDB entry 8H2B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	131	first strand
Strand 2	A	125	127	anti-parallel
Strand 3	A	16	23	anti-parallel
Strand 4	A	3	10	anti-parallel
Strand 5	A	54	55	anti-parallel
Strand 6	A	133	134	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	148	first strand
Strand 2	A	30	39	anti-parallel
Strand 3	A	61	67	anti-parallel
Strand 4	A	79	82	anti-parallel
Strand 5	A	152	155	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	148	first strand
Strand 2	A	30	39	anti-parallel
Strand 3	A	366	370	anti-parallel
Strand 4	A	343	347	parallel

Back to list of sheets
Back to top of page

There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	238	first strand
Strand 2	A	214	219	parallel
Strand 3	A	190	194	parallel
Strand 4	A	262	267	parallel
Strand 5	A	282	290	parallel
Strand 6	A	310	312	parallel
Strand 7	B	310	312	anti-parallel
Strand 8	B	282	290	parallel
Strand 9	B	262	267	parallel
Strand 10	B	190	194	parallel
Strand 11	B	214	219	parallel
Strand 12	B	235	238	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	297	301	first strand
Strand 2	B	297	301	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	130	131	first strand
Strand 2	B	125	127	anti-parallel
Strand 3	B	16	23	anti-parallel
Strand 4	B	3	10	anti-parallel
Strand 5	B	54	55	anti-parallel
Strand 6	B	133	134	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	148	first strand
Strand 2	B	30	39	anti-parallel
Strand 3	B	61	67	anti-parallel
Strand 4	B	79	82	anti-parallel
Strand 5	B	152	155	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	148	first strand
Strand 2	B	30	39	anti-parallel
Strand 3	B	366	370	anti-parallel
Strand 4	B	343	347	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	131	first strand
Strand 2	C	125	127	anti-parallel
Strand 3	C	16	23	anti-parallel
Strand 4	C	3	10	anti-parallel
Strand 5	C	54	55	anti-parallel
Strand 6	C	133	134	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	144	148	first strand
Strand 2	C	30	39	anti-parallel
Strand 3	C	61	67	anti-parallel
Strand 4	C	79	82	anti-parallel
Strand 5	C	152	155	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	144	148	first strand
Strand 2	C	30	39	anti-parallel
Strand 3	C	366	370	anti-parallel
Strand 4	C	343	347	parallel

Back to list of sheets
Back to top of page

There are 12 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	238	first strand
Strand 2	C	214	219	parallel
Strand 3	C	190	194	parallel
Strand 4	C	262	267	parallel
Strand 5	C	282	290	parallel
Strand 6	C	310	312	parallel
Strand 7	D	310	312	anti-parallel
Strand 8	D	282	290	parallel
Strand 9	D	262	267	parallel
Strand 10	D	190	194	parallel
Strand 11	D	214	219	parallel
Strand 12	D	235	238	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	297	301	first strand
Strand 2	D	297	301	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	130	131	first strand
Strand 2	D	125	127	anti-parallel
Strand 3	D	16	23	anti-parallel
Strand 4	D	3	10	anti-parallel
Strand 5	D	54	55	anti-parallel
Strand 6	D	133	134	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	144	148	first strand
Strand 2	D	30	40	anti-parallel
Strand 3	D	61	67	anti-parallel
Strand 4	D	79	82	anti-parallel
Strand 5	D	152	155	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	144	148	first strand
Strand 2	D	30	40	anti-parallel
Strand 3	D	366	370	anti-parallel
Strand 4	D	343	347	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H2B

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H2B