Analysis of interatomic Contacts of Structural Units in PDB entry:
8H2C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H2C entry

There are 4 chains in PDB entry 8H2C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	PHE 342
B	MET 1	PHE 342
C	MET 1	PHE 342
D	GLN 2	VAL 308

There are 80 helices in PDB entry 8H2C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	40	Right-handed alpha
Helix 2	AA2	A	50	55	Right-handed alpha
Helix 3	AA3	A	60	64	Right-handed 310
Helix 4	AA4	A	74	83	Right-handed alpha
Helix 5	AA5	A	85	100	Right-handed alpha
Helix 6	AA6	A	109	117	Right-handed alpha
Helix 7	AA7	A	118	120	Right-handed 310
Helix 8	AA8	A	127	131	Right-handed 310
Helix 9	AA9	A	133	142	Right-handed alpha
Helix 10	AB1	A	155	169	Right-handed alpha
Helix 11	AB2	A	186	190	Right-handed 310
Helix 12	AB3	A	191	192	Right-handed 310
Helix 13	AB4	A	193	203	Right-handed alpha
Helix 14	AB5	A	215	224	Right-handed alpha
Helix 15	AB6	A	249	268	Right-handed alpha
Helix 16	AB7	A	275	282	Right-handed alpha
Helix 17	AB8	A	283	285	Right-handed 310
Helix 18	AB9	A	315	317	Right-handed 310
Helix 19	AC1	A	318	323	Right-handed alpha
Helix 20	AC2	B	25	40	Right-handed alpha
Helix 21	AC3	B	50	55	Right-handed alpha
Helix 22	AC4	B	60	64	Right-handed 310
Helix 23	AC5	B	74	82	Right-handed alpha
Helix 24	AC6	B	87	100	Right-handed alpha
Helix 25	AC7	B	109	117	Right-handed alpha
Helix 26	AC8	B	118	120	Right-handed 310
Helix 27	AC9	B	127	131	Right-handed 310
Helix 28	AD1	B	133	142	Right-handed alpha
Helix 29	AD2	B	155	169	Right-handed alpha
Helix 30	AD3	B	186	190	Right-handed 310
Helix 31	AD4	B	191	192	Right-handed 310
Helix 32	AD5	B	193	203	Right-handed alpha
Helix 33	AD6	B	215	224	Right-handed alpha
Helix 34	AD7	B	249	268	Right-handed alpha
Helix 35	AD8	B	275	282	Right-handed alpha
Helix 36	AD9	B	283	285	Right-handed 310
Helix 37	AE1	B	315	317	Right-handed 310
Helix 38	AE2	B	318	323	Right-handed alpha
Helix 39	AE3	C	25	40	Right-handed alpha
Helix 40	AE4	C	50	55	Right-handed alpha
Helix 41	AE5	C	60	64	Right-handed 310
Helix 42	AE6	C	74	83	Right-handed alpha
Helix 43	AE7	C	85	87	Right-handed 310
Helix 44	AE8	C	88	100	Right-handed alpha
Helix 45	AE9	C	109	117	Right-handed alpha
Helix 46	AF1	C	118	120	Right-handed 310
Helix 47	AF2	C	127	131	Right-handed 310
Helix 48	AF3	C	133	142	Right-handed alpha
Helix 49	AF4	C	155	169	Right-handed alpha
Helix 50	AF5	C	186	190	Right-handed 310
Helix 51	AF6	C	191	192	Right-handed 310
Helix 52	AF7	C	193	203	Right-handed alpha
Helix 53	AF8	C	215	224	Right-handed alpha
Helix 54	AF9	C	243	247	Right-handed 310
Helix 55	AG1	C	249	268	Right-handed alpha
Helix 56	AG2	C	275	282	Right-handed alpha
Helix 57	AG3	C	283	285	Right-handed 310
Helix 58	AG4	C	315	317	Right-handed 310
Helix 59	AG5	C	318	323	Right-handed alpha
Helix 60	AG6	D	25	40	Right-handed alpha
Helix 61	AG7	D	50	55	Right-handed alpha
Helix 62	AG8	D	60	64	Right-handed 310
Helix 63	AG9	D	74	83	Right-handed alpha
Helix 64	AH1	D	85	87	Right-handed 310
Helix 65	AH2	D	88	100	Right-handed alpha
Helix 66	AH3	D	109	117	Right-handed alpha
Helix 67	AH4	D	118	120	Right-handed 310
Helix 68	AH5	D	127	131	Right-handed 310
Helix 69	AH6	D	133	142	Right-handed alpha
Helix 70	AH7	D	155	169	Right-handed alpha
Helix 71	AH8	D	186	190	Right-handed 310
Helix 72	AH9	D	191	192	Right-handed 310
Helix 73	AI1	D	193	203	Right-handed alpha
Helix 74	AI2	D	215	224	Right-handed alpha
Helix 75	AI3	D	243	247	Right-handed 310
Helix 76	AI4	D	249	268	Right-handed alpha
Helix 77	AI5	D	275	282	Right-handed alpha
Helix 78	AI6	D	283	285	Right-handed 310
Helix 79	AI7	D	315	317	Right-handed 310
Helix 80	AI8	D	318	323	Right-handed alpha

There are 11 sheets in PDB entry 8H2C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	3	first strand
Strand 2	A	6	7	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	17	first strand
Strand 2	A	43	48	parallel
Strand 3	A	102	107	parallel
Strand 4	A	124	126	parallel
Strand 5	A	147	150	parallel
Strand 6	A	174	180	parallel
Strand 7	A	205	210	parallel
Strand 8	A	228	232	parallel
Strand 9	A	13	17	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	287	290	first strand
Strand 2	A	305	308	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	3	first strand
Strand 2	B	6	7	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	17	first strand
Strand 2	B	43	48	parallel
Strand 3	B	102	107	parallel
Strand 4	B	124	126	parallel
Strand 5	B	147	150	parallel
Strand 6	B	174	180	parallel
Strand 7	B	205	210	parallel
Strand 8	B	228	232	parallel
Strand 9	B	13	17	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	287	290	first strand
Strand 2	B	305	308	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	3	first strand
Strand 2	C	6	7	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	17	first strand
Strand 2	C	43	48	parallel
Strand 3	C	102	107	parallel
Strand 4	C	124	126	parallel
Strand 5	C	147	150	parallel
Strand 6	C	174	180	parallel
Strand 7	C	205	210	parallel
Strand 8	C	228	232	parallel
Strand 9	C	13	17	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	287	290	first strand
Strand 2	C	305	308	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	17	first strand
Strand 2	D	43	48	parallel
Strand 3	D	102	107	parallel
Strand 4	D	124	126	parallel
Strand 5	D	147	150	parallel
Strand 6	D	174	180	parallel
Strand 7	D	205	210	parallel
Strand 8	D	228	232	parallel
Strand 9	D	13	17	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	290	first strand
Strand 2	D	305	308	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H2C

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H2C