Analysis of interatomic Contacts of Structural Units in PDB entry:
8H36

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H36 entry

There are 6 chains in PDB entry 8H36 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	LYS 20	HIS 108
A	ARG 7	ASP 606
G	SER 327	ALA 720
C	MET 25	ALA 768
B	ARG 7	LEU 602
H	SER 327	SER 327

There are122 helices in PDB entry 8H36. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	81	88	Right-handed alpha
Helix 2	AA2	A	11	27	Right-handed alpha
Helix 3	AA3	A	45	53	Right-handed alpha
Helix 4	AA4	A	53	61	Right-handed alpha
Helix 5	AA5	A	64	68	Right-handed 310
Helix 6	AA6	A	78	92	Right-handed alpha
Helix 7	AA7	A	100	112	Right-handed alpha
Helix 8	AA8	A	113	126	Right-handed alpha
Helix 9	AA9	A	132	144	Right-handed alpha
Helix 10	AB1	A	145	159	Right-handed alpha
Helix 11	AB2	A	159	164	Right-handed alpha
Helix 12	AB3	A	166	171	Right-handed alpha
Helix 13	AB4	A	173	182	Right-handed alpha
Helix 14	AB5	A	190	205	Right-handed alpha
Helix 15	AB6	A	205	210	Right-handed alpha
Helix 16	AB7	A	212	218	Right-handed alpha
Helix 17	AB8	A	228	234	Right-handed alpha
Helix 18	AB9	A	241	250	Right-handed alpha
Helix 19	AC1	A	260	264	Right-handed 310
Helix 20	AC2	G	339	348	Right-handed alpha
Helix 21	AC3	G	400	411	Right-handed alpha
Helix 22	AC4	G	435	439	Right-handed 310
Helix 23	AC5	G	442	508	Right-handed alpha
Helix 24	AC6	G	521	580	Right-handed alpha
Helix 25	AC7	G	583	587	Right-handed 310
Helix 26	AC8	G	590	598	Right-handed alpha
Helix 27	AC9	G	616	620	Right-handed 310
Helix 28	AD1	G	630	638	Right-handed alpha
Helix 29	AD2	G	692	702	Right-handed alpha
Helix 30	AD3	C	26	46	Right-handed alpha
Helix 31	AD4	C	48	52	Right-handed 310
Helix 32	AD5	C	53	67	Right-handed alpha
Helix 33	AD6	C	70	98	Right-handed alpha
Helix 34	AD7	C	100	123	Right-handed alpha
Helix 35	AD8	C	123	130	Right-handed alpha
Helix 36	AD9	C	138	151	Right-handed alpha
Helix 37	AE1	C	154	174	Right-handed alpha
Helix 38	AE2	C	179	193	Right-handed alpha
Helix 39	AE3	C	198	205	Right-handed alpha
Helix 40	AE4	C	205	226	Right-handed alpha
Helix 41	AE5	C	229	248	Right-handed alpha
Helix 42	AE6	C	256	269	Right-handed alpha
Helix 43	AE7	C	272	279	Right-handed alpha
Helix 44	AE8	C	283	291	Right-handed alpha
Helix 45	AE9	C	292	304	Right-handed alpha
Helix 46	AF1	C	308	329	Right-handed alpha
Helix 47	AF2	C	337	359	Right-handed alpha
Helix 48	AF3	C	363	378	Right-handed alpha
Helix 49	AF4	C	383	398	Right-handed alpha
Helix 50	AF5	C	405	421	Right-handed alpha
Helix 51	AF6	C	424	441	Right-handed alpha
Helix 52	AF7	C	449	462	Right-handed alpha
Helix 53	AF8	C	467	495	Right-handed alpha
Helix 54	AF9	C	525	542	Right-handed alpha
Helix 55	AG1	C	598	608	Right-handed alpha
Helix 56	AG2	C	612	619	Right-handed alpha
Helix 57	AG3	C	624	636	Right-handed alpha
Helix 58	AG4	C	684	711	Right-handed alpha
Helix 59	AG5	C	721	730	Right-handed alpha
Helix 60	AG6	C	737	746	Right-handed alpha
Helix 61	AG7	C	747	751	Right-handed 310
Helix 62	AG8	B	11	27	Right-handed alpha
Helix 63	AG9	B	45	53	Right-handed alpha
Helix 64	AH1	B	53	61	Right-handed alpha
Helix 65	AH2	B	64	69	Right-handed alpha
Helix 66	AH3	B	78	91	Right-handed alpha
Helix 67	AH4	B	100	112	Right-handed alpha
Helix 68	AH5	B	113	126	Right-handed alpha
Helix 69	AH6	B	132	144	Right-handed alpha
Helix 70	AH7	B	145	159	Right-handed alpha
Helix 71	AH8	B	159	164	Right-handed alpha
Helix 72	AH9	B	166	171	Right-handed alpha
Helix 73	AI1	B	173	183	Right-handed alpha
Helix 74	AI2	B	190	203	Right-handed alpha
Helix 75	AI3	B	205	210	Right-handed alpha
Helix 76	AI4	B	212	218	Right-handed alpha
Helix 77	AI5	B	229	234	Right-handed alpha
Helix 78	AI6	B	241	247	Right-handed alpha
Helix 79	AI7	H	341	347	Right-handed alpha
Helix 80	AI8	H	400	410	Right-handed alpha
Helix 81	AI9	H	435	439	Right-handed 310
Helix 82	AJ1	H	442	508	Right-handed alpha
Helix 83	AJ2	H	521	581	Right-handed alpha
Helix 84	AJ3	H	584	588	Right-handed 310
Helix 85	AJ4	H	590	600	Right-handed alpha
Helix 86	AJ5	H	616	620	Right-handed 310
Helix 87	AJ6	H	630	639	Right-handed alpha
Helix 88	AJ7	H	690	701	Right-handed alpha
Helix 89	AJ8	F	26	46	Right-handed alpha
Helix 90	AJ9	F	48	52	Right-handed 310
Helix 91	AK1	F	53	67	Right-handed alpha
Helix 92	AK2	F	69	95	Right-handed alpha
Helix 93	AK3	F	100	123	Right-handed alpha
Helix 94	AK4	F	123	130	Right-handed alpha
Helix 95	AK5	F	138	151	Right-handed alpha
Helix 96	AK6	F	154	174	Right-handed alpha
Helix 97	AK7	F	179	193	Right-handed alpha
Helix 98	AK8	F	198	205	Right-handed alpha
Helix 99	AK9	F	205	226	Right-handed alpha
Helix 100	AL1	F	229	250	Right-handed alpha
Helix 101	AL2	F	253	255	Right-handed 310
Helix 102	AL3	F	256	279	Right-handed alpha
Helix 103	AL4	F	283	291	Right-handed alpha
Helix 104	AL5	F	292	304	Right-handed alpha
Helix 105	AL6	F	308	329	Right-handed alpha
Helix 106	AL7	F	337	359	Right-handed alpha
Helix 107	AL8	F	363	378	Right-handed alpha
Helix 108	AL9	F	383	398	Right-handed alpha
Helix 109	AM1	F	405	421	Right-handed alpha
Helix 110	AM2	F	424	441	Right-handed alpha
Helix 111	AM3	F	449	462	Right-handed alpha
Helix 112	AM4	F	466	493	Right-handed alpha
Helix 113	AM5	F	525	542	Right-handed alpha
Helix 114	AM6	F	598	608	Right-handed alpha
Helix 115	AM7	F	612	619	Right-handed alpha
Helix 116	AM8	F	624	636	Right-handed alpha
Helix 117	AM9	F	684	711	Right-handed alpha
Helix 118	AN1	F	721	730	Right-handed alpha
Helix 119	AN2	F	737	746	Right-handed alpha
Helix 120	AN3	F	747	751	Right-handed 310
Helix 121	AN4	D	81	86	Right-handed alpha
Helix 122	AN5	D	87	89	Right-handed 310

There are 28 sheets in PDB entry 8H36. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	502	503	first strand
Strand 2	E	22	27	parallel
Strand 3	C	557	561	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	506	509	first strand
Strand 2	E	30	34	parallel
Strand 3	C	547	549	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	70	72	first strand
Strand 2	E	78	80	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	44	first strand
Strand 2	A	33	37	anti-parallel
Strand 3	A	71	73	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	298	first strand
Strand 2	A	285	289	anti-parallel
Strand 3	A	266	272	anti-parallel
Strand 4	A	580	586	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	312	first strand
Strand 2	A	318	325	anti-parallel
Strand 3	A	345	346	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	312	first strand
Strand 2	A	318	325	anti-parallel
Strand 3	A	351	354	anti-parallel
Strand 4	A	359	362	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	378	first strand
Strand 2	A	381	385	anti-parallel
Strand 3	A	399	402	anti-parallel
Strand 4	A	409	412	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	423	427	first strand
Strand 2	A	430	434	anti-parallel
Strand 3	A	439	442	anti-parallel
Strand 4	A	449	451	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	460	467	first strand
Strand 2	A	470	476	anti-parallel
Strand 3	A	499	503	anti-parallel
Strand 4	A	508	513	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	527	530	first strand
Strand 2	A	533	541	anti-parallel
Strand 3	A	547	555	anti-parallel
Strand 4	A	560	566	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	355	359	first strand
Strand 2	G	368	374	anti-parallel
Strand 3	G	377	385	anti-parallel
Strand 4	G	390	391	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	679	680	first strand
Strand 2	G	666	674	anti-parallel
Strand 3	G	657	663	anti-parallel
Strand 4	G	645	650	anti-parallel
Strand 5	G	716	717	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	645	646	first strand
Strand 2	C	659	660	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	44	first strand
Strand 2	B	33	37	anti-parallel
Strand 3	B	71	73	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	294	298	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	266	274	anti-parallel
Strand 4	B	580	586	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	312	first strand
Strand 2	B	318	321	anti-parallel
Strand 3	B	350	353	anti-parallel
Strand 4	B	360	362	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	325	first strand
Strand 2	B	345	346	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	378	first strand
Strand 2	B	381	385	anti-parallel
Strand 3	B	399	403	anti-parallel
Strand 4	B	409	411	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	423	427	first strand
Strand 2	B	430	434	anti-parallel
Strand 3	B	439	442	anti-parallel
Strand 4	B	449	451	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	463	467	first strand
Strand 2	B	470	474	anti-parallel
Strand 3	B	498	503	anti-parallel
Strand 4	B	508	514	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	524	530	first strand
Strand 2	B	533	541	anti-parallel
Strand 3	B	547	555	anti-parallel
Strand 4	B	560	566	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	355	359	first strand
Strand 2	H	368	374	anti-parallel
Strand 3	H	377	385	anti-parallel
Strand 4	H	390	391	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	678	680	first strand
Strand 2	H	666	675	anti-parallel
Strand 3	H	657	663	anti-parallel
Strand 4	H	645	650	anti-parallel
Strand 5	H	716	717	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	502	503	first strand
Strand 2	D	22	27	parallel
Strand 3	F	557	561	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	506	509	first strand
Strand 2	D	30	34	parallel
Strand 3	F	547	549	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	645	646	first strand
Strand 2	F	659	660	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	72	first strand
Strand 2	D	78	80	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H36

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H36