Analysis of interatomic Contacts of Structural Units in PDB entry:
8H3A

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H3A entry

There are 12 chains in PDB entry 8H3A (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	SER 24	ASN 332
A	ASN 74	LYS 503
B	SER 24	ALA 443
C	ALA 2	MET 408
D	MET 1	GLN 406
F	SER 29	GLN 316
G	PRO 7	LEU 220
H	ALA 10	ASN 209
I	GLU 6	PRO 598
L	MET 25	TYR 766
M	ARG 7	PRO 598
R	LYS 20	HIS 108

There are187 helices in PDB entry 8H3A. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	26	30	Right-handed 310
Helix 2	AA2	E	32	43	Right-handed alpha
Helix 3	AA3	E	44	48	Right-handed 310
Helix 4	AA4	E	58	71	Right-handed alpha
Helix 5	AA5	E	112	128	Right-handed alpha
Helix 6	AA6	E	148	161	Right-handed alpha
Helix 7	AA7	E	171	178	Right-handed alpha
Helix 8	AA8	E	207	218	Right-handed alpha
Helix 9	AA9	E	232	242	Right-handed alpha
Helix 10	AB1	E	254	258	Right-handed 310
Helix 11	AB2	E	260	284	Right-handed alpha
Helix 12	AB3	E	289	331	Right-handed alpha
Helix 13	AB4	A	83	91	Right-handed alpha
Helix 14	AB5	A	93	107	Right-handed alpha
Helix 15	AB6	A	110	123	Right-handed alpha
Helix 16	AB7	A	128	146	Right-handed alpha
Helix 17	AB8	A	164	190	Right-handed alpha
Helix 18	AB9	A	193	212	Right-handed alpha
Helix 19	AC1	A	213	227	Right-handed alpha
Helix 20	AC2	A	230	249	Right-handed alpha
Helix 21	AC3	A	250	264	Right-handed alpha
Helix 22	AC4	A	281	296	Right-handed alpha
Helix 23	AC5	A	299	308	Right-handed alpha
Helix 24	AC6	A	309	314	Right-handed 310
Helix 25	AC7	A	321	337	Right-handed alpha
Helix 26	AC8	A	338	350	Right-handed alpha
Helix 27	AC9	A	351	359	Right-handed alpha
Helix 28	AD1	A	359	371	Right-handed alpha
Helix 29	AD2	A	373	388	Right-handed alpha
Helix 30	AD3	A	394	415	Right-handed alpha
Helix 31	AD4	A	422	428	Right-handed alpha
Helix 32	AD5	A	432	447	Right-handed alpha
Helix 33	AD6	A	466	498	Right-handed alpha
Helix 34	AD7	B	30	43	Right-handed alpha
Helix 35	AD8	B	46	62	Right-handed alpha
Helix 36	AD9	B	66	82	Right-handed alpha
Helix 37	AE1	B	85	100	Right-handed alpha
Helix 38	AE2	B	106	120	Right-handed alpha
Helix 39	AE3	B	124	142	Right-handed alpha
Helix 40	AE4	B	144	162	Right-handed alpha
Helix 41	AE5	B	165	180	Right-handed alpha
Helix 42	AE6	B	190	208	Right-handed alpha
Helix 43	AE7	B	210	225	Right-handed alpha
Helix 44	AE8	B	230	249	Right-handed alpha
Helix 45	AE9	B	250	269	Right-handed alpha
Helix 46	AF1	B	271	287	Right-handed alpha
Helix 47	AF2	B	305	321	Right-handed alpha
Helix 48	AF3	B	322	333	Right-handed alpha
Helix 49	AF4	B	333	338	Right-handed alpha
Helix 50	AF5	B	340	364	Right-handed alpha
Helix 51	AF6	B	371	379	Right-handed alpha
Helix 52	AF7	B	381	395	Right-handed alpha
Helix 53	AF8	B	419	443	Right-handed alpha
Helix 54	AF9	C	3	18	Right-handed alpha
Helix 55	AG1	C	20	29	Right-handed alpha
Helix 56	AG2	C	32	38	Right-handed alpha
Helix 57	AG3	C	41	49	Right-handed alpha
Helix 58	AG4	C	52	67	Right-handed alpha
Helix 59	AG5	C	73	87	Right-handed alpha
Helix 60	AG6	C	96	115	Right-handed alpha
Helix 61	AG7	C	119	132	Right-handed alpha
Helix 62	AG8	C	140	153	Right-handed alpha
Helix 63	AG9	C	157	163	Right-handed alpha
Helix 64	AH1	C	177	195	Right-handed alpha
Helix 65	AH2	C	197	210	Right-handed alpha
Helix 66	AH3	C	217	235	Right-handed alpha
Helix 67	AH4	C	247	257	Right-handed alpha
Helix 68	AH5	C	257	270	Right-handed alpha
Helix 69	AH6	C	271	282	Right-handed alpha
Helix 70	AH7	C	282	287	Right-handed alpha
Helix 71	AH8	C	292	314	Right-handed alpha
Helix 72	AH9	C	319	327	Right-handed alpha
Helix 73	AI1	C	330	344	Right-handed alpha
Helix 74	AI2	C	369	400	Right-handed alpha
Helix 75	AI3	C	400	408	Right-handed alpha
Helix 76	AI4	D	2	14	Right-handed alpha
Helix 77	AI5	D	18	36	Right-handed alpha
Helix 78	AI6	D	37	54	Right-handed alpha
Helix 79	AI7	D	58	73	Right-handed alpha
Helix 80	AI8	D	74	76	Right-handed 310
Helix 81	AI9	D	80	92	Right-handed alpha
Helix 82	AJ1	D	100	117	Right-handed alpha
Helix 83	AJ2	D	119	129	Right-handed alpha
Helix 84	AJ3	D	140	159	Right-handed alpha
Helix 85	AJ4	D	160	174	Right-handed alpha
Helix 86	AJ5	D	175	178	Right-handed 310
Helix 87	AJ6	D	180	199	Right-handed alpha
Helix 88	AJ7	D	200	213	Right-handed alpha
Helix 89	AJ8	D	218	236	Right-handed alpha
Helix 90	AJ9	D	239	250	Right-handed alpha
Helix 91	AK1	D	252	258	Right-handed alpha
Helix 92	AK2	D	260	270	Right-handed alpha
Helix 93	AK3	D	277	286	Right-handed alpha
Helix 94	AK4	D	298	315	Right-handed alpha
Helix 95	AK5	D	321	329	Right-handed alpha
Helix 96	AK6	D	331	345	Right-handed alpha
Helix 97	AK7	D	366	392	Right-handed alpha
Helix 98	AK8	D	392	406	Right-handed alpha
Helix 99	AK9	F	44	62	Right-handed alpha
Helix 100	AL1	F	101	114	Right-handed alpha
Helix 101	AL2	F	134	146	Right-handed alpha
Helix 102	AL3	F	193	209	Right-handed alpha
Helix 103	AL4	F	216	248	Right-handed alpha
Helix 104	AL5	F	254	267	Right-handed alpha
Helix 105	AL6	F	272	313	Right-handed alpha
Helix 106	AL7	G	8	20	Right-handed alpha
Helix 107	AL8	G	24	37	Right-handed alpha
Helix 108	AL9	G	43	48	Right-handed alpha
Helix 109	AM1	G	49	58	Right-handed alpha
Helix 110	AM2	G	61	72	Right-handed alpha
Helix 111	AM3	G	74	81	Right-handed alpha
Helix 112	AM4	G	89	108	Right-handed alpha
Helix 113	AM5	G	113	120	Right-handed alpha
Helix 114	AM6	G	124	138	Right-handed alpha
Helix 115	AM7	G	165	220	Right-handed alpha
Helix 116	AM8	H	11	26	Right-handed alpha
Helix 117	AM9	H	33	47	Right-handed alpha
Helix 118	AN1	H	49	60	Right-handed alpha
Helix 119	AN2	H	61	68	Right-handed alpha
Helix 120	AN3	H	68	84	Right-handed alpha
Helix 121	AN4	H	85	96	Right-handed alpha
Helix 122	AN5	H	102	124	Right-handed alpha
Helix 123	AN6	H	130	138	Right-handed alpha
Helix 124	AN7	H	140	150	Right-handed alpha
Helix 125	AN8	H	192	209	Right-handed alpha
Helix 126	AN9	I	13	27	Right-handed alpha
Helix 127	AO1	I	45	53	Right-handed alpha
Helix 128	AO2	I	55	60	Right-handed alpha
Helix 129	AO3	I	78	92	Right-handed alpha
Helix 130	AO4	I	100	110	Right-handed alpha
Helix 131	AO5	I	115	127	Right-handed alpha
Helix 132	AO6	I	132	143	Right-handed alpha
Helix 133	AO7	I	145	164	Right-handed alpha
Helix 134	AO8	I	166	170	Right-handed 310
Helix 135	AO9	I	173	183	Right-handed alpha
Helix 136	AP1	I	191	203	Right-handed alpha
Helix 137	AP2	I	206	217	Right-handed alpha
Helix 138	AP3	I	218	220	Right-handed 310
Helix 139	AP4	I	228	237	Right-handed alpha
Helix 140	AP5	I	242	250	Right-handed alpha
Helix 141	AP6	L	26	46	Right-handed alpha
Helix 142	AP7	L	54	67	Right-handed alpha
Helix 143	AP8	L	71	96	Right-handed alpha
Helix 144	AP9	L	100	127	Right-handed alpha
Helix 145	AQ1	L	128	133	Right-handed alpha
Helix 146	AQ2	L	138	151	Right-handed alpha
Helix 147	AQ3	L	156	175	Right-handed alpha
Helix 148	AQ4	L	180	195	Right-handed alpha
Helix 149	AQ5	L	199	228	Right-handed alpha
Helix 150	AQ6	L	232	252	Right-handed alpha
Helix 151	AQ7	L	257	280	Right-handed alpha
Helix 152	AQ8	L	283	290	Right-handed alpha
Helix 153	AQ9	L	292	304	Right-handed alpha
Helix 154	AR1	L	308	329	Right-handed alpha
Helix 155	AR2	L	337	360	Right-handed alpha
Helix 156	AR3	L	363	379	Right-handed alpha
Helix 157	AR4	L	383	398	Right-handed alpha
Helix 158	AR5	L	404	421	Right-handed alpha
Helix 159	AR6	L	424	443	Right-handed alpha
Helix 160	AR7	L	449	462	Right-handed alpha
Helix 161	AR8	L	466	493	Right-handed alpha
Helix 162	AR9	L	525	542	Right-handed alpha
Helix 163	AS1	L	598	608	Right-handed alpha
Helix 164	AS2	L	612	619	Right-handed alpha
Helix 165	AS3	L	625	636	Right-handed alpha
Helix 166	AS4	L	684	714	Right-handed alpha
Helix 167	AS5	L	721	730	Right-handed alpha
Helix 168	AS6	L	737	746	Right-handed alpha
Helix 169	AS7	L	747	751	Right-handed 310
Helix 170	AS8	M	11	27	Right-handed alpha
Helix 171	AS9	M	47	53	Right-handed alpha
Helix 172	AT1	M	55	60	Right-handed alpha
Helix 173	AT2	M	64	69	Right-handed alpha
Helix 174	AT3	M	78	91	Right-handed alpha
Helix 175	AT4	M	100	112	Right-handed alpha
Helix 176	AT5	M	113	128	Right-handed alpha
Helix 177	AT6	M	132	143	Right-handed alpha
Helix 178	AT7	M	145	164	Right-handed alpha
Helix 179	AT8	M	166	170	Right-handed 310
Helix 180	AT9	M	173	183	Right-handed alpha
Helix 181	AU1	M	191	204	Right-handed alpha
Helix 182	AU2	M	205	208	Right-handed 310
Helix 183	AU3	M	209	217	Right-handed alpha
Helix 184	AU4	M	221	225	Right-handed 310
Helix 185	AU5	M	230	236	Right-handed alpha
Helix 186	AU6	M	244	250	Right-handed alpha
Helix 187	AU7	R	81	90	Right-handed alpha

There are 26 sheets in PDB entry 8H3A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	221	223	first strand
Strand 2	E	184	188	anti-parallel
Strand 3	E	167	170	anti-parallel
Strand 4	E	132	139	parallel
Strand 5	E	78	86	anti-parallel
Strand 6	E	89	97	anti-parallel
Strand 7	E	54	57	parallel
Strand 8	E	225	227	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	419	421	first strand
Strand 2	A	459	462	anti-parallel
Strand 3	A	451	454	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	369	370	first strand
Strand 2	B	408	411	anti-parallel
Strand 3	B	400	403	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	316	318	first strand
Strand 2	C	357	359	anti-parallel
Strand 3	C	350	352	anti-parallel
Strand 4	H	125	129	parallel
Strand 5	H	161	163	anti-parallel
Strand 6	H	154	156	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	351	353	first strand
Strand 2	D	358	360	anti-parallel
Strand 3	D	316	320	anti-parallel
Strand 4	G	141	146	parallel
Strand 5	G	151	157	anti-parallel
Strand 6	G	110	112	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	178	186	first strand
Strand 2	F	165	175	anti-parallel
Strand 3	F	150	154	anti-parallel
Strand 4	F	120	127	parallel
Strand 5	F	69	77	anti-parallel
Strand 6	F	80	88	anti-parallel
Strand 7	F	40	43	parallel
Strand 8	F	189	190	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	94	first strand
Strand 2	F	97	100	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	40	44	first strand
Strand 2	I	33	37	anti-parallel
Strand 3	I	71	73	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	586	first strand
Strand 2	I	266	275	anti-parallel
Strand 3	I	283	288	anti-parallel
Strand 4	I	295	298	anti-parallel
Strand 5	I	592	593	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	309	312	first strand
Strand 2	I	318	321	anti-parallel
Strand 3	I	350	353	anti-parallel
Strand 4	I	360	363	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	374	378	first strand
Strand 2	I	381	385	anti-parallel
Strand 3	I	399	403	anti-parallel
Strand 4	I	408	411	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	423	427	first strand
Strand 2	I	430	434	anti-parallel
Strand 3	I	439	443	anti-parallel
Strand 4	I	448	451	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	463	467	first strand
Strand 2	I	470	474	anti-parallel
Strand 3	I	499	503	anti-parallel
Strand 4	I	508	511	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	527	530	first strand
Strand 2	I	533	540	anti-parallel
Strand 3	I	548	554	anti-parallel
Strand 4	I	561	567	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	506	509	first strand
Strand 2	R	30	35	parallel
Strand 3	L	546	549	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	591	594	first strand
Strand 2	L	557	561	anti-parallel
Strand 3	R	22	24	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	645	646	first strand
Strand 2	L	659	660	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	40	44	first strand
Strand 2	M	33	37	anti-parallel
Strand 3	M	71	72	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	295	297	first strand
Strand 2	M	283	288	anti-parallel
Strand 3	M	266	275	anti-parallel
Strand 4	M	580	586	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	309	312	first strand
Strand 2	M	318	321	anti-parallel
Strand 3	M	350	354	anti-parallel
Strand 4	M	359	363	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	324	325	first strand
Strand 2	M	345	346	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	374	378	first strand
Strand 2	M	381	385	anti-parallel
Strand 3	M	400	403	anti-parallel
Strand 4	M	408	411	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	423	427	first strand
Strand 2	M	430	434	anti-parallel
Strand 3	M	439	442	anti-parallel
Strand 4	M	449	451	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	463	467	first strand
Strand 2	M	470	474	anti-parallel
Strand 3	M	499	503	anti-parallel
Strand 4	M	508	511	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	527	530	first strand
Strand 2	M	533	541	anti-parallel
Strand 3	M	547	555	anti-parallel
Strand 4	M	560	566	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	78	80	first strand
Strand 2	R	70	72	anti-parallel
Strand 3	R	105	106	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H3A

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H3A