Analysis of interatomic Contacts of Structural Units in PDB entry:
8H3N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H3N entry

There are 7 chains in PDB entry 8H3N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 27	TYR 1138
D	GLU 1	THR 107
E	ASP 1	ILE 106
B	ALA 27	PRO 1140
C	ALA 27	ASP 1139
H	GLU 1	TRP 103
I	THR 22	ILE 106

There are 76 helices in PDB entry 8H3N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	155	158	Right-handed 310
Helix 2	AA2	A	294	304	Right-handed alpha
Helix 3	AA3	A	338	343	Right-handed alpha
Helix 4	AA4	A	364	368	Right-handed 310
Helix 5	AA5	A	383	389	Right-handed 310
Helix 6	AA6	A	405	410	Right-handed 310
Helix 7	AA7	A	416	422	Right-handed alpha
Helix 8	AA8	A	438	443	Right-handed alpha
Helix 9	AA9	A	502	505	Right-handed 310
Helix 10	AB1	A	616	620	Right-handed 310
Helix 11	AB2	A	737	743	Right-handed alpha
Helix 12	AB3	A	746	754	Right-handed alpha
Helix 13	AB4	A	755	757	Right-handed 310
Helix 14	AB5	A	758	783	Right-handed alpha
Helix 15	AB6	A	816	826	Right-handed alpha
Helix 16	AB7	A	849	856	Right-handed alpha
Helix 17	AB8	A	866	885	Right-handed alpha
Helix 18	AB9	A	886	890	Right-handed 310
Helix 19	AC1	A	897	909	Right-handed alpha
Helix 20	AC2	A	912	919	Right-handed alpha
Helix 21	AC3	A	919	941	Right-handed alpha
Helix 22	AC4	A	942	944	Right-handed 310
Helix 23	AC5	A	945	965	Right-handed alpha
Helix 24	AC6	A	966	968	Right-handed 310
Helix 25	AC7	A	976	984	Right-handed alpha
Helix 26	AC8	A	985	1033	Right-handed alpha
Helix 27	AC9	D	28	32	Right-handed 310
Helix 28	AD1	E	79	83	Right-handed 310
Helix 29	AD2	B	294	304	Right-handed alpha
Helix 30	AD3	B	338	343	Right-handed alpha
Helix 31	AD4	B	349	353	Right-handed 310
Helix 32	AD5	B	364	368	Right-handed 310
Helix 33	AD6	B	404	408	Right-handed alpha
Helix 34	AD7	B	417	422	Right-handed alpha
Helix 35	AD8	B	438	443	Right-handed alpha
Helix 36	AD9	B	619	624	Right-handed alpha
Helix 37	AE1	B	633	637	Right-handed 310
Helix 38	AE2	B	737	744	Right-handed alpha
Helix 39	AE3	B	746	754	Right-handed alpha
Helix 40	AE4	B	758	783	Right-handed alpha
Helix 41	AE5	B	816	824	Right-handed alpha
Helix 42	AE6	B	849	856	Right-handed alpha
Helix 43	AE7	B	866	885	Right-handed alpha
Helix 44	AE8	B	886	891	Right-handed alpha
Helix 45	AE9	B	897	909	Right-handed alpha
Helix 46	AF1	B	912	919	Right-handed alpha
Helix 47	AF2	B	919	940	Right-handed alpha
Helix 48	AF3	B	945	965	Right-handed alpha
Helix 49	AF4	B	966	968	Right-handed 310
Helix 50	AF5	B	976	984	Right-handed alpha
Helix 51	AF6	B	985	1033	Right-handed alpha
Helix 52	AF7	C	294	304	Right-handed alpha
Helix 53	AF8	C	337	343	Right-handed alpha
Helix 54	AF9	C	349	353	Right-handed 310
Helix 55	AG1	C	383	389	Right-handed 310
Helix 56	AG2	C	405	410	Right-handed 310
Helix 57	AG3	C	416	422	Right-handed alpha
Helix 58	AG4	C	438	443	Right-handed alpha
Helix 59	AG5	C	616	620	Right-handed 310
Helix 60	AG6	C	737	743	Right-handed alpha
Helix 61	AG7	C	746	753	Right-handed alpha
Helix 62	AG8	C	754	756	Right-handed 310
Helix 63	AG9	C	757	783	Right-handed alpha
Helix 64	AH1	C	816	826	Right-handed alpha
Helix 65	AH2	C	849	855	Right-handed alpha
Helix 66	AH3	C	866	885	Right-handed alpha
Helix 67	AH4	C	886	890	Right-handed 310
Helix 68	AH5	C	897	909	Right-handed alpha
Helix 69	AH6	C	912	918	Right-handed alpha
Helix 70	AH7	C	919	941	Right-handed alpha
Helix 71	AH8	C	942	944	Right-handed 310
Helix 72	AH9	C	945	965	Right-handed alpha
Helix 73	AI1	C	976	981	Right-handed alpha
Helix 74	AI2	C	985	1032	Right-handed alpha
Helix 75	AI3	H	28	32	Right-handed 310
Helix 76	AI4	I	48	52	Right-handed 310

There are 50 sheets in PDB entry 8H3N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	30	first strand
Strand 2	A	61	65	anti-parallel
Strand 3	A	265	269	anti-parallel
Strand 4	A	90	96	anti-parallel
Strand 5	A	188	197	anti-parallel
Strand 6	A	200	209	anti-parallel
Strand 7	A	224	230	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	85	first strand
Strand 2	A	237	241	anti-parallel
Strand 3	A	103	106	anti-parallel
Strand 4	A	116	122	anti-parallel
Strand 5	A	125	135	anti-parallel
Strand 6	A	160	172	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	319	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	645	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	325	first strand
Strand 2	A	538	543	parallel
Strand 3	A	546	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	573	577	anti-parallel
Strand 6	A	565	567	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	395	403	anti-parallel
Strand 3	A	507	514	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	376	380	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	362	first strand
Strand 2	A	524	525	parallel
Strand 3	A	391	392	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	692	696	parallel
Strand 3	A	670	674	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	702	704	first strand
Strand 2	B	788	790	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1077	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1077	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel
Strand 5	A	1113	1114	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	736	first strand
Strand 2	A	858	861	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	788	790	first strand
Strand 2	C	702	704	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1125	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1081	1083	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	5	first strand
Strand 2	D	20	25	anti-parallel
Strand 3	D	77	81	anti-parallel
Strand 4	D	68	72	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	37	first strand
Strand 2	D	47	51	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	95	first strand
Strand 2	D	100	102	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	6	first strand
Strand 2	E	20	24	anti-parallel
Strand 3	E	72	74	anti-parallel
Strand 4	E	63	65	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	12	first strand
Strand 2	E	104	105	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	54	first strand
Strand 2	E	45	49	anti-parallel
Strand 3	E	33	38	anti-parallel
Strand 4	E	85	90	anti-parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	30	first strand
Strand 2	B	61	65	anti-parallel
Strand 3	B	265	269	anti-parallel
Strand 4	B	90	96	anti-parallel
Strand 5	B	188	197	anti-parallel
Strand 6	B	200	208	anti-parallel
Strand 7	B	224	229	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	240	anti-parallel
Strand 3	B	103	107	anti-parallel
Strand 4	B	116	121	anti-parallel
Strand 5	B	126	135	anti-parallel
Strand 6	B	160	172	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	314	first strand
Strand 2	B	596	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	328	first strand
Strand 2	B	539	543	parallel
Strand 3	B	546	552	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	573	577	anti-parallel
Strand 6	B	565	567	anti-parallel
Strand 7	C	42	43	parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	358	first strand
Strand 2	B	395	403	anti-parallel
Strand 3	B	507	514	anti-parallel
Strand 4	B	431	437	anti-parallel
Strand 5	B	378	380	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	362	first strand
Strand 2	B	524	525	parallel
Strand 3	B	391	392	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	692	696	parallel
Strand 3	B	670	674	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1076	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	736	first strand
Strand 2	B	858	861	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1094	1097	first strand
Strand 2	B	1102	1105	anti-parallel
Strand 3	B	1113	1114	anti-parallel

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There are 7 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	30	first strand
Strand 2	C	61	65	anti-parallel
Strand 3	C	265	269	anti-parallel
Strand 4	C	90	95	anti-parallel
Strand 5	C	188	197	anti-parallel
Strand 6	C	200	209	anti-parallel
Strand 7	C	224	229	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	241	anti-parallel
Strand 3	C	103	107	anti-parallel
Strand 4	C	116	120	anti-parallel
Strand 5	C	126	131	anti-parallel
Strand 6	C	166	172	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	328	first strand
Strand 2	C	539	543	parallel
Strand 3	C	546	554	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	573	577	anti-parallel
Strand 6	C	565	567	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	357	first strand
Strand 2	C	396	403	anti-parallel
Strand 3	C	507	514	anti-parallel
Strand 4	C	431	437	anti-parallel
Strand 5	C	378	380	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	362	first strand
Strand 2	C	524	525	parallel
Strand 3	C	391	392	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	692	696	parallel
Strand 3	C	670	674	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1076	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	736	first strand
Strand 2	C	858	861	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1125	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1094	1097	first strand
Strand 2	C	1102	1105	anti-parallel
Strand 3	C	1113	1114	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	59	first strand
Strand 2	H	47	51	anti-parallel
Strand 3	H	34	37	anti-parallel
Strand 4	H	93	94	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	33	34	first strand
Strand 2	I	89	90	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	62	65	first strand
Strand 2	I	72	75	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H3N

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H3N