Analysis of interatomic Contacts of Structural Units in PDB entry:
8H3U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H3U entry

There are 2 chains in PDB entry 8H3U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 183LYS 784
B
 ILE 785HIS 1019
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8H3U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
201 203Right-handed 310
Helix 2
AA2
A
213 217Right-handed 310
Helix 3
AA3
A
286 290Right-handed 310
Helix 4
AA4
A
340 346Right-handed alpha
Helix 5
AA5
A
531 534Right-handed 310
Helix 6
AA6
A
671 675Right-handed 310
Helix 7
AA7
A
708 719Right-handed alpha
Helix 8
AA8
B
833 835Right-handed 310
Helix 9
AA9
B
937 945Right-handed alpha
Helix 10
AB1
B
1007 1009Right-handed 310
Helix 11
AB2
B
1010 1019Right-handed alpha
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There are 13 sheets in PDB entry 8H3U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 190first strand
Strand 2
A
197 199anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
253 258parallel
Strand 3
A
310 315anti-parallel
Strand 4
A
280 284anti-parallel
Strand 5
A
291 296anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 239first strand
Strand 2
A
326 335anti-parallel
Strand 3
A
263 273anti-parallel
Strand 4
A
303 306anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 358first strand
Strand 2
A
409 410anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 370first strand
Strand 2
A
392 395anti-parallel
Strand 3
A
490 499anti-parallel
Strand 4
A
421 429anti-parallel
Strand 5
A
463 469anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 407first strand
Strand 2
A
475 483anti-parallel
Strand 3
A
436 443anti-parallel
Strand 4
A
449 454anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 537first strand
Strand 2
A
626 633anti-parallel
Strand 3
A
564 572anti-parallel
Strand 4
A
605 606anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
594 596first strand
Strand 2
A
579 582anti-parallel
Strand 3
A
614 617anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
693 694first strand
Strand 2
A
699 700anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 729first strand
Strand 2
A
763 767anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
740 743first strand
Strand 2
A
749 752anti-parallel
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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
789 790first strand
Strand 2
B
929 933anti-parallel
Strand 3
B
910 914anti-parallel
Strand 4
B
974 978anti-parallel
Strand 5
B
983 991anti-parallel
Strand 6
B
1002 1005anti-parallel
Strand 7
B
954 957anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
808 812first strand
Strand 2
B
800 804anti-parallel
Strand 3
B
837 841anti-parallel
Strand 4
B
855 864anti-parallel
Strand 5
B
878 882anti-parallel
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