Analysis of interatomic Contacts of Structural Units in PDB entry:
8H3V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H3V entry

There are 15 chains in PDB entry 8H3V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	T 12	A 123
2	T 3	A 114
A	ALA 24	VAL 1100
B	MET 1	TYR 1254
C	GLN 3	SER 228
D	GLN 3	SER 228
E	THR 6	SER 625
F	GLN 13	THR 70
G	TYR 77	ARG 390
S	MET 1	ILE 304
T	MET 1	PRO 303
U	MET 1	PRO 303
V	MET 1	ILE 304
X	VAL 25	ARG 220
Y	VAL 25	ARG 220

There are178 helices in PDB entry 8H3V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	32	45	Right-handed alpha
Helix 2	AA2	A	45	53	Right-handed alpha
Helix 3	AA3	A	81	87	Right-handed alpha
Helix 4	AA4	A	207	212	Right-handed alpha
Helix 5	AA5	A	249	261	Right-handed alpha
Helix 6	AA6	A	263	267	Right-handed 310
Helix 7	AA7	A	270	282	Right-handed alpha
Helix 8	AA8	A	293	309	Right-handed alpha
Helix 9	AA9	A	327	352	Right-handed alpha
Helix 10	AB1	A	367	378	Right-handed alpha
Helix 11	AB2	A	391	400	Right-handed alpha
Helix 12	AB3	A	425	430	Right-handed alpha
Helix 13	AB4	A	544	548	Right-handed 310
Helix 14	AB5	A	554	560	Right-handed alpha
Helix 15	AB6	A	561	563	Right-handed 310
Helix 16	AB7	A	579	587	Right-handed alpha
Helix 17	AB8	A	614	619	Right-handed alpha
Helix 18	AB9	A	706	711	Right-handed alpha
Helix 19	AC1	A	744	749	Right-handed alpha
Helix 20	AC2	A	784	793	Right-handed alpha
Helix 21	AC3	A	821	825	Right-handed 310
Helix 22	AC4	A	896	911	Right-handed alpha
Helix 23	AC5	A	926	943	Right-handed alpha
Helix 24	AC6	A	1018	1023	Right-handed alpha
Helix 25	AC7	A	1032	1040	Right-handed alpha
Helix 26	AC8	A	1044	1057	Right-handed alpha
Helix 27	AC9	A	1068	1082	Right-handed alpha
Helix 28	AD1	B	9	22	Right-handed alpha
Helix 29	AD2	B	25	31	Right-handed alpha
Helix 30	AD3	B	34	48	Right-handed alpha
Helix 31	AD4	B	60	81	Right-handed alpha
Helix 32	AD5	B	86	115	Right-handed alpha
Helix 33	AD6	B	120	126	Right-handed alpha
Helix 34	AD7	B	134	141	Right-handed alpha
Helix 35	AD8	B	168	196	Right-handed alpha
Helix 36	AD9	B	200	205	Right-handed alpha
Helix 37	AE1	B	265	275	Right-handed alpha
Helix 38	AE2	B	295	299	Right-handed 310
Helix 39	AE3	B	314	322	Right-handed alpha
Helix 40	AE4	B	323	328	Right-handed alpha
Helix 41	AE5	B	696	703	Right-handed 310
Helix 42	AE6	B	809	813	Right-handed 310
Helix 43	AE7	B	1011	1019	Right-handed alpha
Helix 44	AE8	B	1022	1026	Right-handed 310
Helix 45	AE9	B	1090	1101	Right-handed alpha
Helix 46	AF1	B	1106	1132	Right-handed alpha
Helix 47	AF2	B	1141	1149	Right-handed alpha
Helix 48	AF3	B	1156	1161	Right-handed 310
Helix 49	AF4	B	1170	1180	Right-handed alpha
Helix 50	AF5	B	1196	1204	Right-handed alpha
Helix 51	AF6	B	1217	1222	Right-handed alpha
Helix 52	AF7	B	1223	1227	Right-handed 310
Helix 53	AF8	B	1234	1240	Right-handed alpha
Helix 54	AF9	C	30	32	Right-handed 310
Helix 55	AG1	C	33	47	Right-handed alpha
Helix 56	AG2	C	74	79	Right-handed alpha
Helix 57	AG3	C	185	189	Right-handed 310
Helix 58	AG4	C	205	208	Right-handed 310
Helix 59	AG5	C	209	222	Right-handed alpha
Helix 60	AG6	D	32	44	Right-handed alpha
Helix 61	AG7	D	74	81	Right-handed alpha
Helix 62	AG8	D	154	158	Right-handed 310
Helix 63	AG9	D	205	208	Right-handed 310
Helix 64	AH1	D	209	222	Right-handed alpha
Helix 65	AH2	E	18	23	Right-handed alpha
Helix 66	AH3	E	97	102	Right-handed 310
Helix 67	AH4	E	114	118	Right-handed 310
Helix 68	AH5	E	123	128	Right-handed alpha
Helix 69	AH6	E	129	131	Right-handed 310
Helix 70	AH7	E	132	140	Right-handed alpha
Helix 71	AH8	E	164	169	Right-handed alpha
Helix 72	AH9	E	170	176	Right-handed 310
Helix 73	AI1	E	190	198	Right-handed alpha
Helix 74	AI2	E	206	215	Right-handed alpha
Helix 75	AI3	E	220	236	Right-handed alpha
Helix 76	AI4	E	240	244	Right-handed 310
Helix 77	AI5	E	253	257	Right-handed 310
Helix 78	AI6	E	272	288	Right-handed alpha
Helix 79	AI7	E	289	293	Right-handed 310
Helix 80	AI8	E	299	308	Right-handed alpha
Helix 81	AI9	E	310	315	Right-handed alpha
Helix 82	AJ1	E	333	337	Right-handed 310
Helix 83	AJ2	E	344	349	Right-handed 310
Helix 84	AJ3	E	376	380	Right-handed 310
Helix 85	AJ4	E	381	383	Right-handed 310
Helix 86	AJ5	E	384	395	Right-handed alpha
Helix 87	AJ6	E	406	411	Right-handed alpha
Helix 88	AJ7	E	412	422	Right-handed alpha
Helix 89	AJ8	E	437	441	Right-handed 310
Helix 90	AJ9	E	480	489	Right-handed alpha
Helix 91	AK1	E	510	522	Right-handed alpha
Helix 92	AK2	E	538	547	Right-handed alpha
Helix 93	AK3	E	609	616	Right-handed alpha
Helix 94	AK4	E	617	625	Right-handed alpha
Helix 95	AK5	F	16	20	Right-handed 310
Helix 96	AK6	F	27	45	Right-handed alpha
Helix 97	AK7	F	50	55	Right-handed 310
Helix 98	AK8	F	56	67	Right-handed alpha
Helix 99	AK9	G	80	90	Right-handed alpha
Helix 100	AL1	G	98	124	Right-handed alpha
Helix 101	AL2	G	131	135	Right-handed 310
Helix 102	AL3	G	140	162	Right-handed alpha
Helix 103	AL4	G	166	173	Right-handed alpha
Helix 104	AL5	G	181	196	Right-handed alpha
Helix 105	AL6	G	209	225	Right-handed alpha
Helix 106	AL7	G	232	237	Right-handed alpha
Helix 107	AL8	G	238	240	Right-handed 310
Helix 108	AL9	G	241	250	Right-handed alpha
Helix 109	AM1	G	260	266	Right-handed alpha
Helix 110	AM2	G	269	279	Right-handed alpha
Helix 111	AM3	G	311	325	Right-handed alpha
Helix 112	AM4	G	330	335	Right-handed alpha
Helix 113	AM5	G	336	340	Right-handed 310
Helix 114	AM6	G	350	358	Right-handed alpha
Helix 115	AM7	G	362	375	Right-handed alpha
Helix 116	AM8	S	2	15	Right-handed alpha
Helix 117	AM9	S	18	23	Right-handed alpha
Helix 118	AN1	S	32	40	Right-handed alpha
Helix 119	AN2	S	67	80	Right-handed alpha
Helix 120	AN3	S	105	116	Right-handed alpha
Helix 121	AN4	S	128	136	Right-handed alpha
Helix 122	AN5	S	185	190	Right-handed alpha
Helix 123	AN6	S	200	212	Right-handed alpha
Helix 124	AN7	S	225	230	Right-handed alpha
Helix 125	AN8	S	287	298	Right-handed alpha
Helix 126	AN9	T	4	13	Right-handed alpha
Helix 127	AO1	T	31	43	Right-handed alpha
Helix 128	AO2	T	58	64	Right-handed alpha
Helix 129	AO3	T	64	84	Right-handed alpha
Helix 130	AO4	T	105	115	Right-handed alpha
Helix 131	AO5	T	130	138	Right-handed alpha
Helix 132	AO6	T	175	182	Right-handed 310
Helix 133	AO7	T	200	211	Right-handed alpha
Helix 134	AO8	T	225	235	Right-handed alpha
Helix 135	AO9	T	246	251	Right-handed alpha
Helix 136	AP1	T	287	299	Right-handed alpha
Helix 137	AP2	U	3	14	Right-handed alpha
Helix 138	AP3	U	18	23	Right-handed alpha
Helix 139	AP4	U	31	41	Right-handed alpha
Helix 140	AP5	U	58	64	Right-handed alpha
Helix 141	AP6	U	64	84	Right-handed alpha
Helix 142	AP7	U	105	111	Right-handed alpha
Helix 143	AP8	U	129	134	Right-handed alpha
Helix 144	AP9	U	175	180	Right-handed alpha
Helix 145	AQ1	U	187	191	Right-handed 310
Helix 146	AQ2	U	202	211	Right-handed alpha
Helix 147	AQ3	U	225	230	Right-handed alpha
Helix 148	AQ4	U	281	285	Right-handed 310
Helix 149	AQ5	U	287	296	Right-handed alpha
Helix 150	AQ6	V	2	11	Right-handed alpha
Helix 151	AQ7	V	11	16	Right-handed alpha
Helix 152	AQ8	V	19	25	Right-handed alpha
Helix 153	AQ9	V	32	44	Right-handed alpha
Helix 154	AR1	V	66	78	Right-handed alpha
Helix 155	AR2	V	104	110	Right-handed alpha
Helix 156	AR3	V	128	135	Right-handed alpha
Helix 157	AR4	V	175	179	Right-handed 310
Helix 158	AR5	V	200	208	Right-handed alpha
Helix 159	AR6	V	227	232	Right-handed alpha
Helix 160	AR7	V	243	251	Right-handed alpha
Helix 161	AR8	V	287	292	Right-handed alpha
Helix 162	AR9	V	292	301	Right-handed alpha
Helix 163	AS1	X	77	81	Right-handed 310
Helix 164	AS2	X	104	114	Right-handed alpha
Helix 165	AS3	X	118	129	Right-handed alpha
Helix 166	AS4	X	129	141	Right-handed alpha
Helix 167	AS5	X	145	155	Right-handed alpha
Helix 168	AS6	X	177	182	Right-handed alpha
Helix 169	AS7	X	191	200	Right-handed alpha
Helix 170	AS8	X	205	209	Right-handed 310
Helix 171	AS9	X	215	220	Right-handed alpha
Helix 172	AT1	Y	77	81	Right-handed 310
Helix 173	AT2	Y	104	114	Right-handed alpha
Helix 174	AT3	Y	119	141	Right-handed alpha
Helix 175	AT4	Y	145	160	Right-handed alpha
Helix 176	AT5	Y	177	182	Right-handed alpha
Helix 177	AT6	Y	191	199	Right-handed alpha
Helix 178	AT7	Y	214	220	Right-handed alpha

There are 42 sheets in PDB entry 8H3V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	57	first strand
Strand 2	A	64	65	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	98	first strand
Strand 2	A	113	115	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	137	first strand
Strand 2	A	384	385	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	326	first strand
Strand 2	A	139	141	anti-parallel
Strand 3	A	402	403	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	149	152	first strand
Strand 2	A	160	163	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	453	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	508	509	first strand
Strand 2	A	518	519	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	608	610	first strand
Strand 2	A	634	635	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	686	687	first strand
Strand 2	A	976	977	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	702	first strand
Strand 2	A	861	862	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	715	720	first strand
Strand 2	A	840	845	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	736	737	first strand
Strand 2	A	771	772	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	818	820	first strand
Strand 2	A	835	837	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	992	993	first strand
Strand 2	E	357	358	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	4	first strand
Strand 2	E	564	565	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	439	443	first strand
Strand 2	B	996	1001	anti-parallel
Strand 3	B	978	979	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	453	first strand
Strand 2	B	986	987	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	461	462	first strand
Strand 2	B	472	473	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	502	504	first strand
Strand 2	B	882	884	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	512	513	first strand
Strand 2	B	874	875	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	551	552	first strand
Strand 2	B	563	564	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	635	642	first strand
Strand 2	B	680	686	anti-parallel
Strand 3	B	672	673	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	660	661	first strand
Strand 2	B	664	665	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	765	766	first strand
Strand 2	B	799	800	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1152	1154	first strand
Strand 2	B	1190	1192	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	52	first strand
Strand 2	C	143	145	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	56	first strand
Strand 2	C	164	165	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	177	first strand
Strand 2	C	197	198	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	180	182	first strand
Strand 2	C	192	194	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	7	first strand
Strand 2	D	23	29	anti-parallel
Strand 3	D	191	198	anti-parallel
Strand 4	D	176	177	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	52	first strand
Strand 2	D	143	145	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	428	429	first strand
Strand 2	E	443	444	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	431	432	first strand
Strand 2	E	473	474	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	556	558	first strand
Strand 2	E	606	608	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	93	94	first strand
Strand 2	S	121	123	parallel
Strand 3	U	221	222	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	161	163	first strand
Strand 2	S	276	277	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	163	165	first strand
Strand 2	U	274	276	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	145	146	first strand
Strand 2	V	276	277	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	263	264	first strand
Strand 2	V	270	271	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	51	54	first strand
Strand 2	X	67	70	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	26	27	first strand
Strand 2	Y	99	100	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	51	54	first strand
Strand 2	Y	67	70	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H3V

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H3V