Analysis of interatomic Contacts of Structural Units in PDB entry:
8H3Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H3Z entry

There are 2 chains in PDB entry 8H3Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1PRO 213
B
 GLU 1ASN 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8H3Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 11Right-handed 310
Helix 2
AA2
A
15 26Right-handed alpha
Helix 3
AA3
A
37 47Right-handed alpha
Helix 4
AA4
A
60 64Right-handed 310
Helix 5
AA5
A
85 90Right-handed 310
Helix 6
AA6
A
94 99Right-handed alpha
Helix 7
AA7
A
110 122Right-handed alpha
Helix 8
AA8
A
135 144Right-handed alpha
Helix 9
AA9
A
157 162Right-handed alpha
Helix 10
AB1
A
193 196Right-handed 310
Helix 11
AB2
A
197 211Right-handed alpha
Helix 12
AB3
B
7 13Right-handed 310
Helix 13
AB4
B
14 26Right-handed alpha
Helix 14
AB5
B
37 47Right-handed alpha
Helix 15
AB6
B
85 90Right-handed 310
Helix 16
AB7
B
94 99Right-handed alpha
Helix 17
AB8
B
110 124Right-handed alpha
Helix 18
AB9
B
135 145Right-handed alpha
Helix 19
AC1
B
157 162Right-handed alpha
Helix 20
AC2
B
193 196Right-handed 310
Helix 21
AC3
B
197 210Right-handed alpha
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There are 5 sheets in PDB entry 8H3Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 153first strand
Strand 2
A
67 82anti-parallel
Strand 3
A
166 169anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 153first strand
Strand 2
A
67 82anti-parallel
Strand 3
A
183 191anti-parallel
Strand 4
A
52 56anti-parallel
Strand 5
A
2 6parallel
Strand 6
A
31 35parallel
Strand 7
B
129 133parallel
Strand 8
B
103 106parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 106first strand
Strand 2
A
129 133parallel
Strand 3
B
31 32parallel
Strand 4
B
2 3parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 55first strand
Strand 2
B
182 191anti-parallel
Strand 3
B
67 82anti-parallel
Strand 4
B
150 153anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 55first strand
Strand 2
B
182 191anti-parallel
Strand 3
B
67 82anti-parallel
Strand 4
B
166 172anti-parallel
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