Analysis of interatomic Contacts of Structural Units in PDB entry:
8H4M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H4M entry

There is 1 chain in PDB entry 8H4M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1ALA 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8H4M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 12Right-handed alpha
Helix 2
AA2
A
13 14Right-handed 310
Helix 3
AA3
A
15 19Right-handed 310
Helix 4
AA4
A
22 35Right-handed alpha
Helix 5
AA5
A
37 55Right-handed alpha
Helix 6
AA6
A
68 78Right-handed alpha
Helix 7
AA7
A
123 131Right-handed alpha
Helix 8
AA8
A
132 136Right-handed 310
Helix 9
AA9
A
148 161Right-handed alpha
Helix 10
AB1
A
171 183Right-handed alpha
Helix 11
AB2
A
188 206Right-handed alpha
Helix 12
AB3
A
226 238Right-handed alpha
Helix 13
AB4
A
239 241Right-handed 310
Helix 14
AB5
A
242 250Right-handed alpha
Helix 15
AB6
A
254 277Right-handed alpha
Helix 16
AB7
A
287 295Right-handed alpha
Helix 17
AB8
A
295 306Right-handed alpha
Helix 18
AB9
A
309 320Right-handed alpha
Helix 19
AC1
A
323 329Right-handed alpha
Helix 20
AC2
A
330 331Right-handed 310
Helix 21
AC3
A
332 336Right-handed 310
Helix 22
AC4
A
344 360Right-handed alpha
Helix 23
AC5
A
371 393Right-handed alpha
Helix 24
AC6
A
393 401Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8H4M.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 102first strand
Strand 2
A
109 115anti-parallel
Strand 3
A
57 63parallel
Strand 4
A
138 143parallel
Strand 5
A
165 169parallel
Strand 6
A
214 216parallel
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