Analysis of interatomic Contacts of Structural Units in PDB entry:
8H4U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H4U entry

There is 1 chain in PDB entry 8H4U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 182GLY 1225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8H4U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
197 205Right-handed alpha
Helix 2
AA2
A
220 230Right-handed alpha
Helix 3
AA3
A
231 245Right-handed alpha
Helix 4
AA4
A
249 272Right-handed alpha
Helix 5
AA5
A
275 294Right-handed alpha
Helix 6
AA6
A
300 310Right-handed alpha
Helix 7
AA7
A
312 320Right-handed alpha
Helix 8
AA8
A
321 352Right-handed alpha
Helix 9
AA9
A
363 394Right-handed alpha
Helix 10
AB1
A
404 413Right-handed alpha
Helix 11
AB2
A
422 435Right-handed alpha
Helix 12
AB3
A
439 449Right-handed alpha
Helix 13
AB4
A
469 475Right-handed alpha
Helix 14
AB5
A
475 496Right-handed alpha
Helix 15
AB6
A
505 517Right-handed alpha
Helix 16
AB7
A
522 535Right-handed alpha
Helix 17
AB8
A
535 547Right-handed alpha
Helix 18
AB9
A
548 553Right-handed alpha
Helix 19
AC1
A
554 562Right-handed alpha
Helix 20
AC2
A
581 597Right-handed alpha
Helix 21
AC3
A
659 674Right-handed alpha
Helix 22
AC4
A
674 682Right-handed alpha
Helix 23
AC5
A
683 688Right-handed alpha
Helix 24
AC6
A
689 703Right-handed alpha
Helix 25
AC7
A
704 709Right-handed 310
Helix 26
AC8
A
714 721Right-handed alpha
Helix 27
AC9
A
726 743Right-handed alpha
Helix 28
AD1
A
745 776Right-handed alpha
Helix 29
AD2
A
779 784Right-handed alpha
Helix 30
AD3
A
789 799Right-handed alpha
Helix 31
AD4
A
815 827Right-handed alpha
Helix 32
AD5
A
829 850Right-handed alpha
Helix 33
AD6
A
858 876Right-handed alpha
Helix 34
AD7
A
884 889Right-handed 310
Helix 35
AD8
A
891 899Right-handed 310
Helix 36
AD9
A
906 911Right-handed alpha
Helix 37
AE1
A
921 931Right-handed alpha
Helix 38
AE2
A
932 940Right-handed alpha
Helix 39
AE3
A
947 956Right-handed alpha
Helix 40
AE4
A
971 984Right-handed alpha
Helix 41
AE5
A
999 1019Right-handed alpha
Helix 42
AE6
A
1020 1057Right-handed alpha
Helix 43
AE7
A
1058 1060Right-handed 310
Helix 44
AE8
A
1065 1074Right-handed alpha
Helix 45
AE9
A
1077 1086Right-handed alpha
Helix 46
AF1
A
1088 1095Right-handed alpha
Helix 47
AF2
A
1096 1098Right-handed 310
Helix 48
AF3
A
1106 1108Right-handed 310
Helix 49
AF4
A
1109 1116Right-handed alpha
Helix 50
AF5
A
1117 1121Right-handed 310
Helix 51
AF6
A
1134 1147Right-handed alpha
Helix 52
AF7
A
1148 1150Right-handed 310
Helix 53
AF8
A
1155 1168Right-handed alpha
Helix 54
AF9
A
1178 1180Right-handed 310
Helix 55
AG1
A
1209 1221Right-handed alpha
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There are 3 sheets in PDB entry 8H4U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
193 195anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1170 1176first strand
Strand 2
A
1182 1189anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1191 1194first strand
Strand 2
A
1203 1206anti-parallel
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