Analysis of interatomic Contacts of Structural Units in PDB entry:
8H50


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H50 entry

There are 3 chains in PDB entry 8H50 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET -2GLU 398
B
 HIS 2ARG 399
C
 MET 1ARG 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 8H50. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
36 50Right-handed alpha
Helix 3
AA3
A
64 76Right-handed alpha
Helix 4
AA4
A
88 100Right-handed alpha
Helix 5
AA5
A
119 124Right-handed alpha
Helix 6
AA6
A
125 133Right-handed alpha
Helix 7
AA7
A
145 158Right-handed alpha
Helix 8
AA8
A
184 194Right-handed alpha
Helix 9
AA9
A
231 241Right-handed alpha
Helix 10
AB1
A
254 267Right-handed alpha
Helix 11
AB2
A
283 292Right-handed alpha
Helix 12
AB3
A
294 299Right-handed 310
Helix 13
AB4
A
331 338Right-handed alpha
Helix 14
AB5
A
341 360Right-handed alpha
Helix 15
AB6
A
376 378Right-handed 310
Helix 16
AB7
A
380 391Right-handed alpha
Helix 17
AB8
B
10 23Right-handed alpha
Helix 18
AB9
B
36 50Right-handed alpha
Helix 19
AC1
B
64 76Right-handed alpha
Helix 20
AC2
B
88 100Right-handed alpha
Helix 21
AC3
B
119 124Right-handed alpha
Helix 22
AC4
B
125 132Right-handed alpha
Helix 23
AC5
B
145 158Right-handed alpha
Helix 24
AC6
B
184 194Right-handed alpha
Helix 25
AC7
B
231 241Right-handed alpha
Helix 26
AC8
B
254 268Right-handed alpha
Helix 27
AC9
B
283 292Right-handed alpha
Helix 28
AD1
B
294 302Right-handed alpha
Helix 29
AD2
B
331 338Right-handed alpha
Helix 30
AD3
B
341 360Right-handed alpha
Helix 31
AD4
B
376 378Right-handed 310
Helix 32
AD5
B
379 391Right-handed alpha
Helix 33
AD6
C
10 23Right-handed alpha
Helix 34
AD7
C
36 50Right-handed alpha
Helix 35
AD8
C
64 76Right-handed alpha
Helix 36
AD9
C
88 99Right-handed alpha
Helix 37
AE1
C
119 124Right-handed alpha
Helix 38
AE2
C
125 132Right-handed alpha
Helix 39
AE3
C
145 158Right-handed alpha
Helix 40
AE4
C
184 194Right-handed alpha
Helix 41
AE5
C
231 241Right-handed alpha
Helix 42
AE6
C
254 268Right-handed alpha
Helix 43
AE7
C
283 292Right-handed alpha
Helix 44
AE8
C
294 299Right-handed 310
Helix 45
AE9
C
331 338Right-handed alpha
Helix 46
AF1
C
341 360Right-handed alpha
Helix 47
AF2
C
376 378Right-handed 310
Helix 48
AF3
C
380 390Right-handed alpha
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There are 12 sheets in PDB entry 8H50. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
27 34parallel
Strand 3
A
2 7parallel
Strand 4
A
79 82parallel
Strand 5
A
102 105parallel
Strand 6
A
135 138parallel
Strand 7
A
371 374parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 207first strand
Strand 2
A
196 200anti-parallel
Strand 3
A
246 252anti-parallel
Strand 4
A
222 229anti-parallel
Strand 5
A
213 218anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 207first strand
Strand 2
A
196 200anti-parallel
Strand 3
A
246 252anti-parallel
Strand 4
A
161 171parallel
Strand 5
A
305 315anti-parallel
Strand 6
A
320 330anti-parallel
Strand 7
A
395 397anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 277first strand
Strand 2
A
280 282anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 59first strand
Strand 2
B
29 34parallel
Strand 3
B
3 7parallel
Strand 4
B
79 82parallel
Strand 5
B
102 105parallel
Strand 6
B
135 138parallel
Strand 7
B
371 374parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 207first strand
Strand 2
B
196 200anti-parallel
Strand 3
B
246 252anti-parallel
Strand 4
B
222 229anti-parallel
Strand 5
B
213 218anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 207first strand
Strand 2
B
196 200anti-parallel
Strand 3
B
246 252anti-parallel
Strand 4
B
161 174parallel
Strand 5
B
303 316anti-parallel
Strand 6
B
319 330anti-parallel
Strand 7
B
395 398anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 277first strand
Strand 2
B
280 282anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 59first strand
Strand 2
C
27 34parallel
Strand 3
C
2 7parallel
Strand 4
C
79 82parallel
Strand 5
C
102 105parallel
Strand 6
C
135 138parallel
Strand 7
C
371 374parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
203 207first strand
Strand 2
C
196 200anti-parallel
Strand 3
C
246 252anti-parallel
Strand 4
C
222 229anti-parallel
Strand 5
C
213 218anti-parallel
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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
203 207first strand
Strand 2
C
196 200anti-parallel
Strand 3
C
246 252anti-parallel
Strand 4
C
161 174parallel
Strand 5
C
303 316anti-parallel
Strand 6
C
319 330anti-parallel
Strand 7
C
395 397anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
275 277first strand
Strand 2
C
280 282anti-parallel
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