Analysis of interatomic Contacts of Structural Units in PDB entry:
8H5B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H5B entry

There are 2 chains in PDB entry 8H5B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4GLU 1001
B
 ILE 63SER 235
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 8H5B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 11Right-handed alpha
Helix 2
AA2
A
17 31Right-handed alpha
Helix 3
AA3
A
32 46Right-handed alpha
Helix 4
AA4
A
50 69Right-handed alpha
Helix 5
AA5
A
84 100Right-handed alpha
Helix 6
AA6
A
104 127Right-handed alpha
Helix 7
AA7
A
129 141Right-handed alpha
Helix 8
AA8
A
143 158Right-handed alpha
Helix 9
AA9
A
159 165Right-handed alpha
Helix 10
AB1
A
167 182Right-handed alpha
Helix 11
AB2
A
186 207Right-handed alpha
Helix 12
AB3
A
212 236Right-handed alpha
Helix 13
AB4
A
243 264Right-handed alpha
Helix 14
AB5
A
265 269Right-handed 310
Helix 15
AB6
A
270 291Right-handed alpha
Helix 16
AB7
A
303 321Right-handed alpha
Helix 17
AB8
A
327 342Right-handed alpha
Helix 18
AB9
A
345 355Right-handed alpha
Helix 19
AC1
A
355 364Right-handed alpha
Helix 20
AC2
A
371 382Right-handed alpha
Helix 21
AC3
A
384 403Right-handed alpha
Helix 22
AC4
A
405 422Right-handed alpha
Helix 23
AC5
A
428 448Right-handed alpha
Helix 24
AC6
A
452 470Right-handed alpha
Helix 25
AC7
A
476 494Right-handed alpha
Helix 26
AC8
A
498 515Right-handed alpha
Helix 27
AC9
A
516 521Right-handed alpha
Helix 28
AD1
A
522 542Right-handed alpha
Helix 29
AD2
A
548 561Right-handed alpha
Helix 30
AD3
A
570 588Right-handed alpha
Helix 31
AD4
A
591 606Right-handed alpha
Helix 32
AD5
A
610 634Right-handed alpha
Helix 33
AD6
A
640 656Right-handed alpha
Helix 34
AD7
A
664 682Right-handed alpha
Helix 35
AD8
A
684 702Right-handed alpha
Helix 36
AD9
A
703 706Right-handed 310
Helix 37
AE1
A
707 722Right-handed alpha
Helix 38
AE2
A
727 732Right-handed alpha
Helix 39
AE3
A
733 745Right-handed alpha
Helix 40
AE4
A
748 767Right-handed alpha
Helix 41
AE5
A
769 787Right-handed alpha
Helix 42
AE6
A
787 798Right-handed alpha
Helix 43
AE7
A
804 820Right-handed alpha
Helix 44
AE8
A
822 838Right-handed alpha
Helix 45
AE9
A
841 846Right-handed alpha
Helix 46
AF1
A
878 896Right-handed alpha
Helix 47
AF2
A
934 941Right-handed alpha
Helix 48
AF3
A
964 978Right-handed alpha
Helix 49
AF4
A
983 990Right-handed alpha
Helix 50
AF5
A
995 1000Right-handed alpha
Helix 51
AF6
B
81 89Right-handed alpha
Helix 52
AF7
B
128 146Right-handed alpha
Helix 53
AF8
B
171 180Right-handed alpha
Helix 54
AF9
B
219 235Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8H5B.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 105first strand
Strand 2
B
112 115anti-parallel
Strand 3
B
120 124anti-parallel
Strand 4
B
66 75anti-parallel
Strand 5
B
156 165anti-parallel
Strand 6
B
211 215anti-parallel
Strand 7
B
202 206anti-parallel
Strand 8
B
194 197anti-parallel
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