Analysis of interatomic Contacts of Structural Units in PDB entry:
8H5S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H5S entry

There is 1 chain in PDB entry 8H5S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 16LEU 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8H5S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 61Right-handed alpha
Helix 2
AA2
A
70 77Right-handed alpha
Helix 3
AA3
A
81 93Right-handed alpha
Helix 4
AA4
A
110 129Right-handed alpha
Helix 5
AA5
A
134 147Right-handed alpha
Helix 6
AA6
A
159 168Right-handed alpha
Helix 7
AA7
A
169 173Right-handed 310
Helix 8
AA8
A
178 185Right-handed alpha
Helix 9
AA9
A
193 204Right-handed alpha
Helix 10
AB1
A
206 208Right-handed 310
Helix 11
AB2
A
216 226Right-handed alpha
Helix 12
AB3
A
239 249Right-handed alpha
Helix 13
AB4
A
257 262Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8H5S.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 177first strand
Strand 2
A
150 154parallel
Strand 3
A
25 28parallel
Strand 4
A
210 214parallel
Strand 5
A
230 234parallel
Strand 6
A
253 255parallel
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