Analysis of interatomic Contacts of Structural Units in PDB entry:
8H63


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H63 entry

There are 2 chains in PDB entry 8H63 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35ALA 496
B
 LEU 2GLY 120
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8H63. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 48Right-handed alpha
Helix 2
AA2
A
50 61Right-handed alpha
Helix 3
AA3
A
71 77Right-handed alpha
Helix 4
AA4
A
93 97Right-handed 310
Helix 5
AA5
A
113 117Right-handed 310
Helix 6
AA6
A
135 139Right-handed 310
Helix 7
AA7
A
157 161Right-handed 310
Helix 8
AA8
A
179 183Right-handed 310
Helix 9
AA9
A
200 204Right-handed 310
Helix 10
AB1
A
222 228Right-handed 310
Helix 11
AB2
A
244 250Right-handed 310
Helix 12
AB3
A
266 272Right-handed 310
Helix 13
AB4
A
288 292Right-handed 310
Helix 14
AB5
A
310 314Right-handed 310
Helix 15
AB6
A
332 338Right-handed 310
Helix 16
AB7
A
354 360Right-handed 310
Helix 17
AB8
A
376 380Right-handed 310
Helix 18
AB9
A
398 402Right-handed 310
Helix 19
AC1
A
449 451Right-handed 310
Helix 20
AC2
B
26 32Right-handed 310
Helix 21
AC3
B
86 90Right-handed 310
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There are 6 sheets in PDB entry 8H63. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 43first strand
Strand 2
A
69 70anti-parallel
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There are 18 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 82first strand
Strand 2
A
102 104parallel
Strand 3
A
124 126parallel
Strand 4
A
146 148parallel
Strand 5
A
168 176parallel
Strand 6
A
190 195parallel
Strand 7
A
211 213parallel
Strand 8
A
233 235parallel
Strand 9
A
255 257parallel
Strand 10
A
277 279parallel
Strand 11
A
299 301parallel
Strand 12
A
321 323parallel
Strand 13
A
343 345parallel
Strand 14
A
365 367parallel
Strand 15
A
387 389parallel
Strand 16
A
409 418parallel
Strand 17
A
482 495parallel
Strand 18
A
422 423parallel
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There are 19 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 82first strand
Strand 2
A
102 104parallel
Strand 3
A
124 126parallel
Strand 4
A
146 148parallel
Strand 5
A
168 176parallel
Strand 6
A
190 195parallel
Strand 7
A
211 213parallel
Strand 8
A
233 235parallel
Strand 9
A
255 257parallel
Strand 10
A
277 279parallel
Strand 11
A
299 301parallel
Strand 12
A
321 323parallel
Strand 13
A
343 345parallel
Strand 14
A
365 367parallel
Strand 15
A
387 389parallel
Strand 16
A
409 418parallel
Strand 17
A
482 495parallel
Strand 18
A
468 479anti-parallel
Strand 19
A
446 447anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 431first strand
Strand 2
A
457 461anti-parallel
Strand 3
A
452 454anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
67 72anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
114 119parallel
Strand 3
B
91 98anti-parallel
Strand 4
B
33 39anti-parallel
Strand 5
B
46 51anti-parallel
Strand 6
B
57 59anti-parallel
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