Analysis of interatomic Contacts of Structural Units in PDB entry:
8H64

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H64 entry

There are 8 chains in PDB entry 8H64 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 40	ALA 496
B	VAL 2	SER 122
C	ALA 36	ALA 496
D	VAL 2	SER 122
E	GLN 40	ALA 496
F	VAL 2	SER 122
G	ASP 41	ALA 496
H	VAL 2	SER 122

There are 88 helices in PDB entry 8H64. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	48	Right-handed alpha
Helix 2	AA2	A	50	61	Right-handed alpha
Helix 3	AA3	A	71	76	Right-handed alpha
Helix 4	AA4	A	93	97	Right-handed 310
Helix 5	AA5	A	113	117	Right-handed 310
Helix 6	AA6	A	135	139	Right-handed 310
Helix 7	AA7	A	157	161	Right-handed 310
Helix 8	AA8	A	179	183	Right-handed 310
Helix 9	AA9	A	200	204	Right-handed 310
Helix 10	AB1	A	222	228	Right-handed 310
Helix 11	AB2	A	244	250	Right-handed 310
Helix 12	AB3	A	266	272	Right-handed 310
Helix 13	AB4	A	288	292	Right-handed 310
Helix 14	AB5	A	310	314	Right-handed 310
Helix 15	AB6	A	332	338	Right-handed 310
Helix 16	AB7	A	354	360	Right-handed 310
Helix 17	AB8	A	376	380	Right-handed 310
Helix 18	AB9	A	398	402	Right-handed 310
Helix 19	AC1	A	449	451	Right-handed 310
Helix 20	AC2	B	28	30	Right-handed 310
Helix 21	AC3	B	60	63	Right-handed 310
Helix 22	AC4	B	85	89	Right-handed 310
Helix 23	AC5	C	44	48	Right-handed alpha
Helix 24	AC6	C	50	61	Right-handed alpha
Helix 25	AC7	C	71	76	Right-handed alpha
Helix 26	AC8	C	93	97	Right-handed 310
Helix 27	AC9	C	113	117	Right-handed 310
Helix 28	AD1	C	135	139	Right-handed 310
Helix 29	AD2	C	157	161	Right-handed 310
Helix 30	AD3	C	179	183	Right-handed 310
Helix 31	AD4	C	200	204	Right-handed 310
Helix 32	AD5	C	222	228	Right-handed 310
Helix 33	AD6	C	244	250	Right-handed 310
Helix 34	AD7	C	266	272	Right-handed 310
Helix 35	AD8	C	288	292	Right-handed 310
Helix 36	AD9	C	310	314	Right-handed 310
Helix 37	AE1	C	332	338	Right-handed 310
Helix 38	AE2	C	354	360	Right-handed 310
Helix 39	AE3	C	376	382	Right-handed 310
Helix 40	AE4	C	398	402	Right-handed 310
Helix 41	AE5	C	449	451	Right-handed 310
Helix 42	AE6	D	28	30	Right-handed 310
Helix 43	AE7	D	60	63	Right-handed 310
Helix 44	AE8	D	85	89	Right-handed 310
Helix 45	AE9	E	44	48	Right-handed alpha
Helix 46	AF1	E	50	61	Right-handed alpha
Helix 47	AF2	E	71	76	Right-handed alpha
Helix 48	AF3	E	93	97	Right-handed 310
Helix 49	AF4	E	113	117	Right-handed 310
Helix 50	AF5	E	135	139	Right-handed 310
Helix 51	AF6	E	157	161	Right-handed 310
Helix 52	AF7	E	179	183	Right-handed 310
Helix 53	AF8	E	200	204	Right-handed 310
Helix 54	AF9	E	222	228	Right-handed 310
Helix 55	AG1	E	244	250	Right-handed 310
Helix 56	AG2	E	266	272	Right-handed 310
Helix 57	AG3	E	288	292	Right-handed 310
Helix 58	AG4	E	310	314	Right-handed 310
Helix 59	AG5	E	332	338	Right-handed 310
Helix 60	AG6	E	354	360	Right-handed 310
Helix 61	AG7	E	376	380	Right-handed 310
Helix 62	AG8	E	398	402	Right-handed 310
Helix 63	AG9	E	449	451	Right-handed 310
Helix 64	AH1	F	28	30	Right-handed 310
Helix 65	AH2	F	60	63	Right-handed 310
Helix 66	AH3	F	85	89	Right-handed 310
Helix 67	AH4	G	44	48	Right-handed alpha
Helix 68	AH5	G	50	61	Right-handed alpha
Helix 69	AH6	G	71	76	Right-handed alpha
Helix 70	AH7	G	93	97	Right-handed 310
Helix 71	AH8	G	113	117	Right-handed 310
Helix 72	AH9	G	135	139	Right-handed 310
Helix 73	AI1	G	157	161	Right-handed 310
Helix 74	AI2	G	179	183	Right-handed 310
Helix 75	AI3	G	200	204	Right-handed 310
Helix 76	AI4	G	222	228	Right-handed 310
Helix 77	AI5	G	244	250	Right-handed 310
Helix 78	AI6	G	266	272	Right-handed 310
Helix 79	AI7	G	288	292	Right-handed 310
Helix 80	AI8	G	310	314	Right-handed 310
Helix 81	AI9	G	332	338	Right-handed 310
Helix 82	AJ1	G	354	360	Right-handed 310
Helix 83	AJ2	G	376	380	Right-handed 310
Helix 84	AJ3	G	398	402	Right-handed 310
Helix 85	AJ4	G	449	451	Right-handed 310
Helix 86	AJ5	H	28	30	Right-handed 310
Helix 87	AJ6	H	60	63	Right-handed 310
Helix 88	AJ7	H	85	89	Right-handed 310

There are 28 sheets in PDB entry 8H64. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	A	69	70	anti-parallel

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There are 16 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	82	first strand
Strand 2	A	102	104	parallel
Strand 3	A	124	126	parallel
Strand 4	A	146	148	parallel
Strand 5	A	168	176	parallel
Strand 6	A	190	195	parallel
Strand 7	A	211	213	parallel
Strand 8	A	233	235	parallel
Strand 9	A	255	257	parallel
Strand 10	A	277	279	parallel
Strand 11	A	299	301	parallel
Strand 12	A	321	323	parallel
Strand 13	A	343	345	parallel
Strand 14	A	365	367	parallel
Strand 15	A	387	389	parallel
Strand 16	A	409	411	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	415	418	first strand
Strand 2	A	482	495	parallel
Strand 3	A	422	423	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	415	418	first strand
Strand 2	A	482	495	parallel
Strand 3	A	468	479	anti-parallel
Strand 4	A	446	447	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	431	first strand
Strand 2	A	457	461	anti-parallel
Strand 3	A	452	454	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	7	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	76	81	anti-parallel
Strand 4	B	66	71	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	117	121	parallel
Strand 3	B	90	98	anti-parallel
Strand 4	B	32	39	anti-parallel
Strand 5	B	46	52	anti-parallel
Strand 6	B	55	58	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	C	69	70	anti-parallel

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There are 16 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	82	first strand
Strand 2	C	102	104	parallel
Strand 3	C	124	126	parallel
Strand 4	C	146	148	parallel
Strand 5	C	168	176	parallel
Strand 6	C	190	195	parallel
Strand 7	C	211	213	parallel
Strand 8	C	233	235	parallel
Strand 9	C	255	257	parallel
Strand 10	C	277	279	parallel
Strand 11	C	299	301	parallel
Strand 12	C	321	323	parallel
Strand 13	C	343	345	parallel
Strand 14	C	365	367	parallel
Strand 15	C	387	389	parallel
Strand 16	C	409	411	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	415	418	first strand
Strand 2	C	482	495	parallel
Strand 3	C	422	423	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	415	418	first strand
Strand 2	C	482	495	parallel
Strand 3	C	468	479	anti-parallel
Strand 4	C	446	447	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	429	431	first strand
Strand 2	C	457	459	anti-parallel
Strand 3	C	452	454	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	76	81	anti-parallel
Strand 4	D	66	71	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	117	121	parallel
Strand 3	D	90	98	anti-parallel
Strand 4	D	32	39	anti-parallel
Strand 5	D	46	52	anti-parallel
Strand 6	D	55	58	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	42	43	first strand
Strand 2	E	69	70	anti-parallel

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There are 16 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	80	82	first strand
Strand 2	E	102	104	parallel
Strand 3	E	124	126	parallel
Strand 4	E	146	148	parallel
Strand 5	E	168	176	parallel
Strand 6	E	190	195	parallel
Strand 7	E	211	213	parallel
Strand 8	E	233	235	parallel
Strand 9	E	255	257	parallel
Strand 10	E	277	279	parallel
Strand 11	E	299	301	parallel
Strand 12	E	321	323	parallel
Strand 13	E	343	345	parallel
Strand 14	E	365	367	parallel
Strand 15	E	387	389	parallel
Strand 16	E	409	411	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	415	418	first strand
Strand 2	E	482	495	parallel
Strand 3	E	422	423	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	415	418	first strand
Strand 2	E	482	495	parallel
Strand 3	E	468	479	anti-parallel
Strand 4	E	446	447	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	429	431	first strand
Strand 2	E	457	459	anti-parallel
Strand 3	E	452	454	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	18	25	anti-parallel
Strand 3	F	76	81	anti-parallel
Strand 4	F	66	71	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	117	121	parallel
Strand 3	F	90	98	anti-parallel
Strand 4	F	32	39	anti-parallel
Strand 5	F	46	52	anti-parallel
Strand 6	F	55	58	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	42	43	first strand
Strand 2	G	69	70	anti-parallel

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There are 16 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	80	82	first strand
Strand 2	G	102	104	parallel
Strand 3	G	124	126	parallel
Strand 4	G	146	148	parallel
Strand 5	G	168	176	parallel
Strand 6	G	190	195	parallel
Strand 7	G	211	213	parallel
Strand 8	G	233	235	parallel
Strand 9	G	255	257	parallel
Strand 10	G	277	279	parallel
Strand 11	G	299	301	parallel
Strand 12	G	321	323	parallel
Strand 13	G	343	345	parallel
Strand 14	G	365	367	parallel
Strand 15	G	387	389	parallel
Strand 16	G	409	411	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	415	418	first strand
Strand 2	G	482	495	parallel
Strand 3	G	422	423	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	415	418	first strand
Strand 2	G	482	495	parallel
Strand 3	G	468	479	anti-parallel
Strand 4	G	446	447	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	427	431	first strand
Strand 2	G	457	461	anti-parallel
Strand 3	G	452	454	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	76	81	anti-parallel
Strand 4	H	66	71	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	117	121	parallel
Strand 3	H	90	98	anti-parallel
Strand 4	H	32	39	anti-parallel
Strand 5	H	46	52	anti-parallel
Strand 6	H	55	58	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H64

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H64