Analysis of interatomic Contacts of Structural Units in PDB entry:
8H67

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H67 entry

There are 15 chains in PDB entry 8H67 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	U 1	U 38
C	A -7	A 3
D	T -3	A 5
A	VAL 11	GLY 237
E	ASN 3	VAL 301
F	ASN 3	VAL 301
G	ASN 3	VAL 301
H	ASN 3	VAL 301
J	ASN 3	GLY 300
K	ASN 3	LEU 299
L	GLU 7	GLN 547
M	THR 8	LYS 118
N	ARG 9	LYS 118
O	ARG 9	TYR 115
I	ASN 3	VAL 301

There are100 helices in PDB entry 8H67. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	40	52	Right-handed alpha
Helix 2	AA2	A	105	111	Right-handed alpha
Helix 3	AA3	A	138	150	Right-handed alpha
Helix 4	AA4	E	45	60	Right-handed alpha
Helix 5	AA5	E	89	93	Right-handed 310
Helix 6	AA6	E	181	194	Right-handed alpha
Helix 7	AA7	E	236	249	Right-handed alpha
Helix 8	AA8	E	269	278	Right-handed alpha
Helix 9	AA9	E	286	300	Right-handed alpha
Helix 10	AB1	F	45	60	Right-handed alpha
Helix 11	AB2	F	103	107	Right-handed 310
Helix 12	AB3	F	180	195	Right-handed alpha
Helix 13	AB4	F	231	235	Right-handed 310
Helix 14	AB5	F	240	244	Right-handed 310
Helix 15	AB6	F	261	267	Right-handed alpha
Helix 16	AB7	F	269	278	Right-handed alpha
Helix 17	AB8	F	286	300	Right-handed alpha
Helix 18	AB9	G	47	60	Right-handed alpha
Helix 19	AC1	G	89	94	Right-handed alpha
Helix 20	AC2	G	180	195	Right-handed alpha
Helix 21	AC3	G	237	245	Right-handed alpha
Helix 22	AC4	G	262	267	Right-handed alpha
Helix 23	AC5	G	269	276	Right-handed alpha
Helix 24	AC6	G	286	300	Right-handed alpha
Helix 25	AC7	H	47	60	Right-handed alpha
Helix 26	AC8	H	89	94	Right-handed alpha
Helix 27	AC9	H	180	195	Right-handed alpha
Helix 28	AD1	H	237	245	Right-handed alpha
Helix 29	AD2	H	262	267	Right-handed alpha
Helix 30	AD3	H	269	276	Right-handed alpha
Helix 31	AD4	H	286	300	Right-handed alpha
Helix 32	AD5	J	47	60	Right-handed alpha
Helix 33	AD6	J	88	94	Right-handed alpha
Helix 34	AD7	J	102	107	Right-handed 310
Helix 35	AD8	J	181	193	Right-handed alpha
Helix 36	AD9	J	240	245	Right-handed alpha
Helix 37	AE1	J	263	267	Right-handed 310
Helix 38	AE2	J	269	278	Right-handed alpha
Helix 39	AE3	J	286	300	Right-handed alpha
Helix 40	AE4	K	47	60	Right-handed alpha
Helix 41	AE5	K	87	94	Right-handed alpha
Helix 42	AE6	K	176	180	Right-handed 310
Helix 43	AE7	K	181	195	Right-handed alpha
Helix 44	AE8	K	271	279	Right-handed alpha
Helix 45	AE9	K	288	299	Right-handed alpha
Helix 46	AF1	L	16	18	Right-handed 310
Helix 47	AF2	L	20	38	Right-handed alpha
Helix 48	AF3	L	40	51	Right-handed alpha
Helix 49	AF4	L	69	81	Right-handed alpha
Helix 50	AF5	L	126	132	Right-handed 310
Helix 51	AF6	L	135	137	Right-handed 310
Helix 52	AF7	L	138	151	Right-handed alpha
Helix 53	AF8	L	155	158	Right-handed 310
Helix 54	AF9	L	159	165	Right-handed alpha
Helix 55	AG1	L	169	173	Right-handed 310
Helix 56	AG2	L	177	189	Right-handed alpha
Helix 57	AG3	L	217	224	Right-handed alpha
Helix 58	AG4	L	225	230	Right-handed 310
Helix 59	AG5	L	259	273	Right-handed alpha
Helix 60	AG6	L	290	309	Right-handed alpha
Helix 61	AG7	L	314	318	Right-handed alpha
Helix 62	AG8	L	345	356	Right-handed alpha
Helix 63	AG9	L	364	373	Right-handed 310
Helix 64	AH1	L	383	388	Right-handed 310
Helix 65	AH2	L	390	400	Right-handed alpha
Helix 66	AH3	L	401	406	Right-handed alpha
Helix 67	AH4	L	409	423	Right-handed alpha
Helix 68	AH5	L	435	459	Right-handed alpha
Helix 69	AH6	L	461	468	Right-handed alpha
Helix 70	AH7	L	471	492	Right-handed alpha
Helix 71	AH8	L	497	502	Right-handed alpha
Helix 72	AH9	L	502	507	Right-handed alpha
Helix 73	AI1	L	519	527	Right-handed alpha
Helix 74	AI2	L	528	539	Right-handed alpha
Helix 75	AI3	L	540	542	Right-handed 310
Helix 76	AI4	M	10	31	Right-handed alpha
Helix 77	AI5	M	34	41	Right-handed alpha
Helix 78	AI6	M	41	66	Right-handed alpha
Helix 79	AI7	M	67	72	Right-handed 310
Helix 80	AI8	M	75	80	Right-handed alpha
Helix 81	AI9	M	87	98	Right-handed alpha
Helix 82	AJ1	M	100	115	Right-handed alpha
Helix 83	AJ2	N	10	31	Right-handed alpha
Helix 84	AJ3	N	43	66	Right-handed alpha
Helix 85	AJ4	N	69	76	Right-handed alpha
Helix 86	AJ5	N	101	114	Right-handed alpha
Helix 87	AJ6	O	10	31	Right-handed alpha
Helix 88	AJ7	O	33	40	Right-handed 310
Helix 89	AJ8	O	41	64	Right-handed alpha
Helix 90	AJ9	O	66	81	Right-handed alpha
Helix 91	AK1	O	84	91	Right-handed alpha
Helix 92	AK2	O	91	98	Right-handed alpha
Helix 93	AK3	O	100	115	Right-handed alpha
Helix 94	AK4	I	47	60	Right-handed alpha
Helix 95	AK5	I	89	94	Right-handed alpha
Helix 96	AK6	I	180	195	Right-handed alpha
Helix 97	AK7	I	237	245	Right-handed alpha
Helix 98	AK8	I	262	267	Right-handed alpha
Helix 99	AK9	I	269	276	Right-handed alpha
Helix 100	AL1	I	286	300	Right-handed alpha

There are 28 sheets in PDB entry 8H67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	131	first strand
Strand 2	A	16	19	anti-parallel
Strand 3	A	172	174	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	136	first strand
Strand 2	A	76	78	anti-parallel
Strand 3	A	233	235	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	183	186	anti-parallel
Strand 3	A	219	221	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	90	first strand
Strand 2	A	124	126	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	11	first strand
Strand 2	E	167	170	anti-parallel
Strand 3	E	125	127	anti-parallel
Strand 4	E	43	44	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	28	29	first strand
Strand 2	E	159	160	parallel
Strand 3	E	136	137	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	67	69	first strand
Strand 2	E	76	78	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	6	11	first strand
Strand 2	F	168	173	anti-parallel
Strand 3	F	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	36	first strand
Strand 2	F	39	44	anti-parallel
Strand 3	F	125	126	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	121	122	first strand
Strand 2	G	168	172	anti-parallel
Strand 3	G	7	11	anti-parallel
Strand 4	G	212	217	anti-parallel
Strand 5	G	259	260	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	15	17	first strand
Strand 2	G	163	165	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	34	36	first strand
Strand 2	G	39	42	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	68	69	first strand
Strand 2	G	76	77	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	121	122	first strand
Strand 2	H	168	172	anti-parallel
Strand 3	H	7	11	anti-parallel
Strand 4	H	212	217	anti-parallel
Strand 5	H	259	260	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	15	17	first strand
Strand 2	H	163	165	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	34	36	first strand
Strand 2	H	39	42	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	68	69	first strand
Strand 2	H	76	77	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	43	44	first strand
Strand 2	J	125	127	anti-parallel
Strand 3	J	167	171	anti-parallel
Strand 4	J	8	12	anti-parallel
Strand 5	J	214	215	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	66	68	first strand
Strand 2	J	77	79	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	14	first strand
Strand 2	L	63	68	anti-parallel
Strand 3	L	54	56	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	83	88	first strand
Strand 2	L	119	124	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	232	234	first strand
Strand 2	L	250	257	anti-parallel
Strand 3	L	319	330	anti-parallel
Strand 4	L	333	342	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	237	239	first strand
Strand 2	L	245	247	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	278	279	first strand
Strand 2	L	282	283	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	121	122	first strand
Strand 2	I	168	172	anti-parallel
Strand 3	I	7	11	anti-parallel
Strand 4	I	212	217	anti-parallel
Strand 5	I	259	260	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	15	17	first strand
Strand 2	I	163	165	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	34	36	first strand
Strand 2	I	39	42	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	68	69	first strand
Strand 2	I	76	77	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H67

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H67