Analysis of interatomic Contacts of Structural Units in PDB entry:
8H6F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H6F entry

There are 6 chains in PDB entry 8H6F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 26	LYS 1149
B	PRO 26	LYS 1149
C	PRO 26	LYS 1149
X	THR 8	THR 267
Y	THR 8	THR 267
Z	THR 8	THR 267

There are 85 helices in PDB entry 8H6F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	304	Right-handed alpha
Helix 2	AA2	A	337	343	Right-handed alpha
Helix 3	AA3	A	366	371	Right-handed alpha
Helix 4	AA4	A	417	422	Right-handed alpha
Helix 5	AA5	A	502	506	Right-handed 310
Helix 6	AA6	A	619	624	Right-handed alpha
Helix 7	AA7	A	630	637	Right-handed 310
Helix 8	AA8	A	737	743	Right-handed alpha
Helix 9	AA9	A	746	754	Right-handed alpha
Helix 10	AB1	A	755	757	Right-handed 310
Helix 11	AB2	A	758	783	Right-handed alpha
Helix 12	AB3	A	816	826	Right-handed alpha
Helix 13	AB4	A	866	884	Right-handed alpha
Helix 14	AB5	A	886	890	Right-handed 310
Helix 15	AB6	A	897	909	Right-handed alpha
Helix 16	AB7	A	913	918	Right-handed alpha
Helix 17	AB8	A	919	940	Right-handed alpha
Helix 18	AB9	A	945	965	Right-handed alpha
Helix 19	AC1	A	966	968	Right-handed 310
Helix 20	AC2	A	976	983	Right-handed alpha
Helix 21	AC3	A	985	988	Right-handed 310
Helix 22	AC4	A	989	1033	Right-handed alpha
Helix 23	AC5	A	1141	1146	Right-handed alpha
Helix 24	AC6	B	294	304	Right-handed alpha
Helix 25	AC7	B	337	341	Right-handed 310
Helix 26	AC8	B	367	372	Right-handed 310
Helix 27	AC9	B	383	387	Right-handed 310
Helix 28	AD1	B	502	506	Right-handed 310
Helix 29	AD2	B	619	623	Right-handed 310
Helix 30	AD3	B	630	634	Right-handed 310
Helix 31	AD4	B	737	742	Right-handed alpha
Helix 32	AD5	B	746	754	Right-handed alpha
Helix 33	AD6	B	755	757	Right-handed 310
Helix 34	AD7	B	761	783	Right-handed alpha
Helix 35	AD8	B	816	826	Right-handed alpha
Helix 36	AD9	B	866	884	Right-handed alpha
Helix 37	AE1	B	886	890	Right-handed 310
Helix 38	AE2	B	897	908	Right-handed alpha
Helix 39	AE3	B	913	918	Right-handed alpha
Helix 40	AE4	B	919	941	Right-handed alpha
Helix 41	AE5	B	945	965	Right-handed alpha
Helix 42	AE6	B	966	968	Right-handed 310
Helix 43	AE7	B	976	984	Right-handed alpha
Helix 44	AE8	B	989	1033	Right-handed alpha
Helix 45	AE9	B	1141	1146	Right-handed alpha
Helix 46	AF1	C	172	176	Right-handed 310
Helix 47	AF2	C	294	304	Right-handed alpha
Helix 48	AF3	C	349	353	Right-handed 310
Helix 49	AF4	C	364	369	Right-handed alpha
Helix 50	AF5	C	403	410	Right-handed 310
Helix 51	AF6	C	416	423	Right-handed alpha
Helix 52	AF7	C	619	624	Right-handed alpha
Helix 53	AF8	C	630	637	Right-handed alpha
Helix 54	AF9	C	737	742	Right-handed alpha
Helix 55	AG1	C	746	754	Right-handed alpha
Helix 56	AG2	C	755	757	Right-handed 310
Helix 57	AG3	C	760	783	Right-handed alpha
Helix 58	AG4	C	816	826	Right-handed alpha
Helix 59	AG5	C	866	884	Right-handed alpha
Helix 60	AG6	C	886	890	Right-handed 310
Helix 61	AG7	C	897	908	Right-handed alpha
Helix 62	AG8	C	913	918	Right-handed alpha
Helix 63	AG9	C	919	941	Right-handed alpha
Helix 64	AH1	C	945	965	Right-handed alpha
Helix 65	AH2	C	976	984	Right-handed alpha
Helix 66	AH3	C	985	1033	Right-handed alpha
Helix 67	AH4	C	1140	1148	Right-handed alpha
Helix 68	AH5	X	17	27	Right-handed alpha
Helix 69	AH6	X	40	44	Right-handed 310
Helix 70	AH7	X	59	63	Right-handed 310
Helix 71	AH8	X	78	83	Right-handed 310
Helix 72	AH9	X	104	108	Right-handed 310
Helix 73	AI1	X	200	205	Right-handed alpha
Helix 74	AI2	X	225	235	Right-handed alpha
Helix 75	AI3	X	236	239	Right-handed 310
Helix 76	AI4	X	246	251	Right-handed alpha
Helix 77	AI5	Y	16	27	Right-handed alpha
Helix 78	AI6	Y	37	43	Right-handed alpha
Helix 79	AI7	Y	79	85	Right-handed 310
Helix 80	AI8	Y	225	235	Right-handed alpha
Helix 81	AI9	Z	17	27	Right-handed alpha
Helix 82	AJ1	Z	37	44	Right-handed alpha
Helix 83	AJ2	Z	79	83	Right-handed 310
Helix 84	AJ3	Z	201	205	Right-handed 310
Helix 85	AJ4	Z	223	235	Right-handed alpha

There are 42 sheets in PDB entry 8H6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	30	first strand
Strand 2	A	61	65	anti-parallel
Strand 3	A	265	269	anti-parallel
Strand 4	A	90	94	anti-parallel
Strand 5	A	192	197	anti-parallel
Strand 6	A	200	204	anti-parallel
Strand 7	A	225	229	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	37	first strand
Strand 2	A	222	223	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	238	anti-parallel
Strand 3	A	104	107	anti-parallel
Strand 4	A	117	121	anti-parallel
Strand 5	A	126	130	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	319	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	644	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	327	first strand
Strand 2	A	539	542	parallel
Strand 3	A	547	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	573	577	anti-parallel
Strand 6	A	565	567	anti-parallel
Strand 7	B	42	43	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	357	first strand
Strand 2	A	396	400	anti-parallel
Strand 3	A	510	512	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	692	696	parallel
Strand 3	A	670	674	anti-parallel
Strand 4	A	664	665	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	702	704	first strand
Strand 2	B	788	790	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	713	first strand
Strand 2	A	1074	1078	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1103	1105	anti-parallel
Strand 5	A	1113	1114	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	717	728	first strand
Strand 2	A	1059	1070	anti-parallel
Strand 3	A	1047	1055	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	736	first strand
Strand 2	A	858	861	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	787	788	first strand
Strand 2	C	701	702	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1087	1090	anti-parallel
Strand 3	A	1081	1082	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	30	first strand
Strand 2	B	61	62	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	222	229	parallel
Strand 3	B	200	208	anti-parallel
Strand 4	B	189	197	anti-parallel
Strand 5	B	90	94	anti-parallel
Strand 6	B	266	269	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	49	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	52	55	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	49	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	240	anti-parallel
Strand 3	B	104	107	anti-parallel
Strand 4	B	118	121	anti-parallel
Strand 5	B	126	129	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	355	357	first strand
Strand 2	B	396	398	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	378	379	first strand
Strand 2	B	432	433	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	539	542	first strand
Strand 2	B	547	554	anti-parallel
Strand 3	B	584	588	anti-parallel
Strand 4	B	575	577	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	692	696	parallel
Strand 3	B	670	674	anti-parallel
Strand 4	B	664	665	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	702	704	first strand
Strand 2	C	788	790	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1078	anti-parallel
Strand 3	B	1047	1055	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1078	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	735	736	first strand
Strand 2	B	858	859	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1125	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	31	first strand
Strand 2	C	60	62	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	37	first strand
Strand 2	C	222	229	parallel
Strand 3	C	200	205	anti-parallel
Strand 4	C	190	197	anti-parallel
Strand 5	C	90	94	anti-parallel
Strand 6	C	266	269	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	49	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	52	55	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	49	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	85	first strand
Strand 2	C	237	239	anti-parallel
Strand 3	C	106	107	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	120	first strand
Strand 2	C	127	129	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	539	543	first strand
Strand 2	C	546	554	anti-parallel
Strand 3	C	584	588	anti-parallel
Strand 4	C	573	577	anti-parallel
Strand 5	C	565	567	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	692	696	parallel
Strand 3	C	670	674	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1076	anti-parallel
Strand 3	C	1047	1055	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	736	first strand
Strand 2	C	858	860	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1094	1097	first strand
Strand 2	C	1102	1105	anti-parallel
Strand 3	C	1113	1114	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H6F

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H6F