Analysis of interatomic Contacts of Structural Units in PDB entry:
8H6S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H6S entry

There are 4 chains in PDB entry 8H6S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 16ARG 321
B
 GLY 19LEU 318
C
 ALA 34PHE 128
D
 ARG 32GLY 129
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 8H6S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 43Right-handed alpha
Helix 2
AA2
A
43 58Right-handed alpha
Helix 3
AA3
A
60 67Right-handed alpha
Helix 4
AA4
A
73 96Right-handed alpha
Helix 5
AA5
A
107 116Right-handed alpha
Helix 6
AA6
A
120 140Right-handed alpha
Helix 7
AA7
A
155 170Right-handed alpha
Helix 8
AA8
A
192 203Right-handed alpha
Helix 9
AA9
A
220 231Right-handed alpha
Helix 10
AB1
A
255 266Right-handed alpha
Helix 11
AB2
A
273 283Right-handed alpha
Helix 12
AB3
A
300 305Right-handed alpha
Helix 13
AB4
A
313 319Right-handed alpha
Helix 14
AB5
B
43 57Right-handed alpha
Helix 15
AB6
B
73 96Right-handed alpha
Helix 16
AB7
B
107 116Right-handed alpha
Helix 17
AB8
B
120 140Right-handed alpha
Helix 18
AB9
B
155 170Right-handed alpha
Helix 19
AC1
B
192 203Right-handed alpha
Helix 20
AC2
B
220 231Right-handed alpha
Helix 21
AC3
B
255 266Right-handed alpha
Helix 22
AC4
B
273 283Right-handed alpha
Helix 23
AC5
B
300 305Right-handed alpha
Helix 24
AC6
B
313 318Right-handed alpha
Helix 25
AC7
C
35 40Right-handed alpha
Helix 26
AC8
C
43 67Right-handed alpha
Helix 27
AC9
C
79 84Right-handed alpha
Helix 28
AD1
C
86 102Right-handed alpha
Helix 29
AD2
C
108 113Right-handed alpha
Helix 30
AD3
C
115 128Right-handed alpha
Helix 31
AD4
D
33 40Right-handed alpha
Helix 32
AD5
D
43 67Right-handed alpha
Helix 33
AD6
D
79 84Right-handed alpha
Helix 34
AD7
D
86 102Right-handed alpha
Helix 35
AD8
D
108 113Right-handed alpha
Helix 36
AD9
D
115 129Right-handed alpha
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There are 4 sheets in PDB entry 8H6S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 253first strand
Strand 2
A
244 246anti-parallel
Strand 3
A
101 104parallel
Strand 4
A
20 25parallel
Strand 5
A
285 291parallel
Strand 6
A
308 312parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 211first strand
Strand 2
A
146 152anti-parallel
Strand 3
A
183 189anti-parallel
Strand 4
A
173 180anti-parallel
Strand 5
A
271 272parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 253first strand
Strand 2
B
244 245anti-parallel
Strand 3
B
101 104parallel
Strand 4
B
20 25parallel
Strand 5
B
285 291parallel
Strand 6
B
308 312parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 211first strand
Strand 2
B
146 152anti-parallel
Strand 3
B
183 189anti-parallel
Strand 4
B
173 180anti-parallel
Strand 5
B
271 272parallel
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