Analysis of interatomic Contacts of Structural Units in PDB entry:
8H72


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H72 entry

There are 2 chains in PDB entry 8H72 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 16ALA 343
B
 THR 16ALA 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8H72. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 50Right-handed alpha
Helix 2
AA2
A
55 66Right-handed alpha
Helix 3
AA3
A
66 75Right-handed alpha
Helix 4
AA4
A
79 101Right-handed alpha
Helix 5
AA5
A
107 121Right-handed alpha
Helix 6
AA6
A
132 145Right-handed alpha
Helix 7
AA7
A
149 176Right-handed alpha
Helix 8
AA8
A
181 193Right-handed alpha
Helix 9
AA9
A
194 201Right-handed alpha
Helix 10
AB1
A
202 204Right-handed 310
Helix 11
AB2
A
209 214Right-handed alpha
Helix 12
AB3
A
215 243Right-handed alpha
Helix 13
AB4
A
250 260Right-handed alpha
Helix 14
AB5
A
262 285Right-handed alpha
Helix 15
AB6
A
294 320Right-handed alpha
Helix 16
AB7
A
320 325Right-handed alpha
Helix 17
AB8
A
327 335Right-handed alpha
Helix 18
AB9
B
36 50Right-handed alpha
Helix 19
AC1
B
55 66Right-handed alpha
Helix 20
AC2
B
66 75Right-handed alpha
Helix 21
AC3
B
79 99Right-handed alpha
Helix 22
AC4
B
109 121Right-handed alpha
Helix 23
AC5
B
132 145Right-handed alpha
Helix 24
AC6
B
149 168Right-handed alpha
Helix 25
AC7
B
181 193Right-handed alpha
Helix 26
AC8
B
194 201Right-handed alpha
Helix 27
AC9
B
202 204Right-handed 310
Helix 28
AD1
B
209 214Right-handed alpha
Helix 29
AD2
B
215 244Right-handed alpha
Helix 30
AD3
B
250 260Right-handed alpha
Helix 31
AD4
B
262 285Right-handed alpha
Helix 32
AD5
B
294 320Right-handed alpha
Helix 33
AD6
B
320 325Right-handed alpha
Helix 34
AD7
B
327 335Right-handed alpha
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There are 2 sheets in PDB entry 8H72. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
336 338anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 19first strand
Strand 2
B
336 338anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il