Analysis of interatomic Contacts of Structural Units in PDB entry:
8H8I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H8I entry

There is 1 chain in PDB entry 8H8I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8H8I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 34Right-handed alpha
Helix 2
AA2
A
54 71Right-handed alpha
Helix 3
AA3
A
72 78Right-handed 310
Helix 4
AA4
A
112 117Right-handed alpha
Helix 5
AA5
A
124 131Right-handed 310
Helix 6
AA6
A
137 143Right-handed 310
Helix 7
AA7
A
170 187Right-handed alpha
Helix 8
AA8
A
203 207Right-handed 310
Helix 9
AA9
A
235 250Right-handed alpha
Helix 10
AB1
A
260 278Right-handed alpha
Helix 11
AB2
A
319 325Right-handed alpha
Helix 12
AB3
A
326 340Right-handed alpha
Helix 13
AB4
A
342 356Right-handed alpha
Helix 14
AB5
A
426 436Right-handed alpha
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There are 3 sheets in PDB entry 8H8I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 12first strand
Strand 2
A
101 109anti-parallel
Strand 3
A
147 153parallel
Strand 4
A
157 164anti-parallel
Strand 5
A
41 48anti-parallel
Strand 6
A
395 398anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 27first strand
Strand 2
A
90 96anti-parallel
Strand 3
A
79 84anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 234first strand
Strand 2
A
419 425anti-parallel
Strand 3
A
407 412anti-parallel
Strand 4
A
372 377parallel
Strand 5
A
284 292parallel
Strand 6
A
310 318anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il