Analysis of interatomic Contacts of Structural Units in PDB entry:
8H8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H8X entry

There is 1 chain in PDB entry 8H8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 906
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 8H8X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 17Right-handed alpha
Helix 2
AA2
A
28 40Right-handed alpha
Helix 3
AA3
A
42 50Right-handed alpha
Helix 4
AA4
A
67 76Right-handed alpha
Helix 5
AA5
A
78 87Right-handed alpha
Helix 6
AA6
A
100 109Right-handed alpha
Helix 7
AA7
A
110 120Right-handed alpha
Helix 8
AA8
A
133 141Right-handed alpha
Helix 9
AA9
A
144 152Right-handed alpha
Helix 10
AB1
A
166 175Right-handed alpha
Helix 11
AB2
A
176 186Right-handed alpha
Helix 12
AB3
A
199 208Right-handed alpha
Helix 13
AB4
A
210 219Right-handed alpha
Helix 14
AB5
A
232 240Right-handed alpha
Helix 15
AB6
A
241 252Right-handed alpha
Helix 16
AB7
A
254 261Right-handed alpha
Helix 17
AB8
A
269 284Right-handed alpha
Helix 18
AB9
A
284 308Right-handed alpha
Helix 19
AC1
A
312 334Right-handed alpha
Helix 20
AC2
A
351 355Right-handed 310
Helix 21
AC3
A
357 359Right-handed 310
Helix 22
AC4
A
360 382Right-handed alpha
Helix 23
AC5
A
443 464Right-handed alpha
Helix 24
AC6
A
473 483Right-handed alpha
Helix 25
AC7
A
483 494Right-handed alpha
Helix 26
AC8
A
495 500Right-handed 310
Helix 27
AC9
A
502 508Right-handed alpha
Helix 28
AD1
A
508 515Right-handed alpha
Helix 29
AD2
A
515 520Right-handed alpha
Helix 30
AD3
A
524 530Right-handed alpha
Helix 31
AD4
A
532 537Right-handed alpha
Helix 32
AD5
A
561 573Right-handed alpha
Helix 33
AD6
A
575 579Right-handed 310
Helix 34
AD7
A
596 608Right-handed alpha
Helix 35
AD8
A
610 614Right-handed 310
Helix 36
AD9
A
629 634Right-handed 310
Helix 37
AE1
A
638 654Right-handed alpha
Helix 38
AE2
A
663 671Right-handed alpha
Helix 39
AE3
A
676 683Right-handed 310
Helix 40
AE4
A
684 697Right-handed alpha
Helix 41
AE5
A
698 702Right-handed 310
Helix 42
AE6
A
736 765Right-handed alpha
Helix 43
AE7
A
769 774Right-handed alpha
Helix 44
AE8
A
780 787Right-handed alpha
Helix 45
AE9
A
792 799Right-handed alpha
Helix 46
AF1
A
810 821Right-handed alpha
Helix 47
AF2
A
824 837Right-handed alpha
Helix 48
AF3
A
844 849Right-handed 310
Helix 49
AF4
A
887 904Right-handed alpha
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There are 4 sheets in PDB entry 8H8X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 557first strand
Strand 2
A
584 586parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 618first strand
Strand 2
A
625 627anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
709 713first strand
Strand 2
A
718 722anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
801 802first strand
Strand 2
A
859 862parallel
Strand 3
A
879 882parallel
Strand 4
A
872 874anti-parallel
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