Analysis of interatomic Contacts of Structural Units in PDB entry:
8H93

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8H93 entry

There are 6 chains in PDB entry 8H93 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 97	ASN 1059
B	ASP 146	TYR 581
C	SER 26	GLU 114
D	ASP 97	ASN 1059
E	ASP 146	TYR 581
F	SER 26	GLU 114

There are 94 helices in PDB entry 8H93. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	97	109	Right-handed alpha
Helix 2	AA2	A	119	129	Right-handed alpha
Helix 3	AA3	A	150	165	Right-handed alpha
Helix 4	AA4	A	180	182	Right-handed 310
Helix 5	AA5	A	189	198	Right-handed alpha
Helix 6	AA6	A	200	208	Right-handed alpha
Helix 7	AA7	A	222	229	Right-handed alpha
Helix 8	AA8	A	246	255	Right-handed alpha
Helix 9	AA9	A	272	277	Right-handed alpha
Helix 10	AB1	A	292	304	Right-handed alpha
Helix 11	AB2	A	309	320	Right-handed alpha
Helix 12	AB3	A	320	328	Right-handed alpha
Helix 13	AB4	A	329	346	Right-handed alpha
Helix 14	AB5	A	356	373	Right-handed alpha
Helix 15	AB6	A	380	401	Right-handed alpha
Helix 16	AB7	A	406	413	Right-handed alpha
Helix 17	AB8	A	416	425	Right-handed alpha
Helix 18	AB9	A	444	462	Right-handed alpha
Helix 19	AC1	A	486	499	Right-handed alpha
Helix 20	AC2	A	500	512	Right-handed alpha
Helix 21	AC3	A	518	532	Right-handed alpha
Helix 22	AC4	A	538	552	Right-handed alpha
Helix 23	AC5	A	554	562	Right-handed alpha
Helix 24	AC6	A	574	586	Right-handed alpha
Helix 25	AC7	A	623	639	Right-handed alpha
Helix 26	AC8	A	653	665	Right-handed alpha
Helix 27	AC9	A	681	683	Right-handed 310
Helix 28	AD1	A	684	695	Right-handed alpha
Helix 29	AD2	A	709	722	Right-handed alpha
Helix 30	AD3	A	738	751	Right-handed alpha
Helix 31	AD4	A	766	779	Right-handed alpha
Helix 32	AD5	A	795	807	Right-handed alpha
Helix 33	AD6	A	823	836	Right-handed alpha
Helix 34	AD7	A	852	865	Right-handed alpha
Helix 35	AD8	A	880	893	Right-handed alpha
Helix 36	AD9	A	912	923	Right-handed alpha
Helix 37	AE1	A	937	950	Right-handed alpha
Helix 38	AE2	A	968	978	Right-handed alpha
Helix 39	AE3	A	994	1007	Right-handed alpha
Helix 40	AE4	A	1018	1022	Right-handed 310
Helix 41	AE5	A	1023	1037	Right-handed alpha
Helix 42	AE6	A	1045	1049	Right-handed 310
Helix 43	AE7	B	157	176	Right-handed alpha
Helix 44	AE8	B	254	258	Right-handed 310
Helix 45	AE9	C	37	42	Right-handed alpha
Helix 46	AF1	C	51	59	Right-handed alpha
Helix 47	AF2	C	62	73	Right-handed alpha
Helix 48	AF3	C	94	114	Right-handed alpha
Helix 49	AF4	D	98	109	Right-handed alpha
Helix 50	AF5	D	119	129	Right-handed alpha
Helix 51	AF6	D	150	165	Right-handed alpha
Helix 52	AF7	D	189	198	Right-handed alpha
Helix 53	AF8	D	201	211	Right-handed alpha
Helix 54	AF9	D	222	229	Right-handed alpha
Helix 55	AG1	D	245	255	Right-handed alpha
Helix 56	AG2	D	272	280	Right-handed alpha
Helix 57	AG3	D	292	304	Right-handed alpha
Helix 58	AG4	D	309	320	Right-handed alpha
Helix 59	AG5	D	320	328	Right-handed alpha
Helix 60	AG6	D	329	346	Right-handed alpha
Helix 61	AG7	D	356	373	Right-handed alpha
Helix 62	AG8	D	380	400	Right-handed alpha
Helix 63	AG9	D	406	413	Right-handed alpha
Helix 64	AH1	D	416	425	Right-handed alpha
Helix 65	AH2	D	444	459	Right-handed alpha
Helix 66	AH3	D	460	462	Right-handed 310
Helix 67	AH4	D	488	498	Right-handed alpha
Helix 68	AH5	D	500	512	Right-handed alpha
Helix 69	AH6	D	518	532	Right-handed alpha
Helix 70	AH7	D	538	552	Right-handed alpha
Helix 71	AH8	D	554	562	Right-handed alpha
Helix 72	AH9	D	574	586	Right-handed alpha
Helix 73	AI1	D	623	639	Right-handed alpha
Helix 74	AI2	D	653	665	Right-handed alpha
Helix 75	AI3	D	684	695	Right-handed alpha
Helix 76	AI4	D	709	722	Right-handed alpha
Helix 77	AI5	D	740	751	Right-handed alpha
Helix 78	AI6	D	766	779	Right-handed alpha
Helix 79	AI7	D	795	807	Right-handed alpha
Helix 80	AI8	D	823	836	Right-handed alpha
Helix 81	AI9	D	853	865	Right-handed alpha
Helix 82	AJ1	D	880	892	Right-handed alpha
Helix 83	AJ2	D	910	923	Right-handed alpha
Helix 84	AJ3	D	936	951	Right-handed alpha
Helix 85	AJ4	D	969	979	Right-handed alpha
Helix 86	AJ5	D	994	1006	Right-handed alpha
Helix 87	AJ6	D	1018	1022	Right-handed 310
Helix 88	AJ7	D	1023	1037	Right-handed alpha
Helix 89	AJ8	E	157	174	Right-handed alpha
Helix 90	AJ9	E	254	258	Right-handed 310
Helix 91	AK1	F	37	42	Right-handed alpha
Helix 92	AK2	F	51	59	Right-handed alpha
Helix 93	AK3	F	61	73	Right-handed alpha
Helix 94	AK4	F	94	114	Right-handed alpha

There are 23 sheets in PDB entry 8H93. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	178	first strand
Strand 2	A	216	220	parallel
Strand 3	A	263	269	parallel
Strand 4	A	140	145	parallel
Strand 5	A	284	289	parallel
Strand 6	C	28	32	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	188	first strand
Strand 2	A	244	245	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	430	432	first strand
Strand 2	A	439	441	anti-parallel

Back to list of sheets
Back to top of page

There are 17 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	567	571	first strand
Strand 2	A	593	597	parallel
Strand 3	A	644	646	parallel
Strand 4	A	673	675	parallel
Strand 5	A	700	704	parallel
Strand 6	A	729	733	parallel
Strand 7	A	757	761	parallel
Strand 8	A	786	790	parallel
Strand 9	A	814	818	parallel
Strand 10	A	843	847	parallel
Strand 11	A	871	875	parallel
Strand 12	A	900	903	parallel
Strand 13	A	928	931	parallel
Strand 14	A	957	961	parallel
Strand 15	A	985	989	parallel
Strand 16	A	1014	1016	parallel
Strand 17	A	1041	1042	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	327	328	first strand
Strand 2	B	284	290	parallel
Strand 3	B	574	579	anti-parallel
Strand 4	B	565	569	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	296	300	first strand
Strand 2	B	307	312	anti-parallel
Strand 3	B	315	320	anti-parallel
Strand 4	B	333	336	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	351	first strand
Strand 2	B	358	362	anti-parallel
Strand 3	B	368	371	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	391	396	first strand
Strand 2	B	401	406	anti-parallel
Strand 3	B	410	415	anti-parallel
Strand 4	B	420	426	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	434	438	first strand
Strand 2	B	441	445	anti-parallel
Strand 3	B	451	455	anti-parallel
Strand 4	B	460	465	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	471	475	first strand
Strand 2	B	483	487	anti-parallel
Strand 3	B	491	495	anti-parallel
Strand 4	B	504	508	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	513	518	first strand
Strand 2	B	524	529	anti-parallel
Strand 3	B	533	538	anti-parallel
Strand 4	B	544	549	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	50	first strand
Strand 2	C	86	92	anti-parallel
Strand 3	C	75	79	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	176	178	first strand
Strand 2	D	218	220	parallel
Strand 3	D	264	269	parallel
Strand 4	D	140	145	parallel
Strand 5	D	284	289	parallel
Strand 6	F	28	32	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	567	571	first strand
Strand 2	D	593	597	parallel

Back to list of sheets
Back to top of page

There are 15 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	644	645	first strand
Strand 2	D	673	675	parallel
Strand 3	D	700	704	parallel
Strand 4	D	729	733	parallel
Strand 5	D	757	761	parallel
Strand 6	D	786	788	parallel
Strand 7	D	814	817	parallel
Strand 8	D	843	846	parallel
Strand 9	D	871	874	parallel
Strand 10	D	900	903	parallel
Strand 11	D	928	931	parallel
Strand 12	D	957	961	parallel
Strand 13	D	985	989	parallel
Strand 14	D	1014	1016	parallel
Strand 15	D	1041	1042	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	327	328	first strand
Strand 2	E	283	291	parallel
Strand 3	E	573	580	anti-parallel
Strand 4	E	565	566	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	307	312	first strand
Strand 2	E	315	320	anti-parallel
Strand 3	E	333	336	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	346	351	first strand
Strand 2	E	357	362	anti-parallel
Strand 3	E	369	372	anti-parallel
Strand 4	E	380	382	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	395	396	first strand
Strand 2	E	401	405	anti-parallel
Strand 3	E	410	415	anti-parallel
Strand 4	E	420	426	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	436	437	first strand
Strand 2	E	441	445	anti-parallel
Strand 3	E	450	455	anti-parallel
Strand 4	E	460	466	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	471	476	first strand
Strand 2	E	482	487	anti-parallel
Strand 3	E	491	496	anti-parallel
Strand 4	E	504	508	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	515	518	first strand
Strand 2	E	524	528	anti-parallel
Strand 3	E	534	538	anti-parallel
Strand 4	E	544	548	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	47	50	first strand
Strand 2	F	86	92	anti-parallel
Strand 3	F	75	79	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8H93

Analysis of interatomic Contacts of Structural Units in PDB entry:
8H93