Analysis of interatomic Contacts of Structural Units in PDB entry:
8H97


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8H97 entry

There is 1 chain in PDB entry 8H97 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 27THR 645
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8H97. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 53Right-handed alpha
Helix 2
AA2
A
61 65Right-handed 310
Helix 3
AA3
A
72 79Right-handed alpha
Helix 4
AA4
A
89 98Right-handed alpha
Helix 5
AA5
A
110 128Right-handed alpha
Helix 6
AA6
A
129 138Right-handed 310
Helix 7
AA7
A
168 183Right-handed alpha
Helix 8
AA8
A
201 206Right-handed alpha
Helix 9
AA9
A
216 234Right-handed alpha
Helix 10
AB1
A
254 260Right-handed alpha
Helix 11
AB2
A
260 269Right-handed alpha
Helix 12
AB3
A
270 272Right-handed 310
Helix 13
AB4
A
294 313Right-handed alpha
Helix 14
AB5
A
327 331Right-handed 310
Helix 15
AB6
A
336 356Right-handed alpha
Helix 16
AB7
A
357 359Right-handed 310
Helix 17
AB8
A
372 376Right-handed 310
Helix 18
AB9
A
407 415Right-handed alpha
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There are 7 sheets in PDB entry 8H97. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 490first strand
Strand 2
A
468 479anti-parallel
Strand 3
A
504 511anti-parallel
Strand 4
A
441 448anti-parallel
Strand 5
A
431 438anti-parallel
Strand 6
A
420 426anti-parallel
Strand 7
A
28 41anti-parallel
Strand 8
A
519 527parallel
Strand 9
A
628 639anti-parallel
Strand 10
A
533 534anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 499first strand
Strand 2
A
454 461anti-parallel
Strand 3
A
28 41parallel
Strand 4
A
519 527parallel
Strand 5
A
628 639anti-parallel
Strand 6
A
554 565anti-parallel
Strand 7
A
599 608anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
84 85parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
142 144parallel
Strand 3
A
194 196parallel
Strand 4
A
238 244parallel
Strand 5
A
274 285parallel
Strand 6
A
288 290anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
142 144parallel
Strand 3
A
194 196parallel
Strand 4
A
238 244parallel
Strand 5
A
274 285parallel
Strand 6
A
318 325parallel
Strand 7
A
361 366parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 391first strand
Strand 2
A
402 404anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 545first strand
Strand 2
A
616 621anti-parallel
Strand 3
A
574 577anti-parallel
Strand 4
A
580 582anti-parallel
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