Analysis of interatomic Contacts of Structural Units in PDB entry:
8HAT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HAT entry

There are 6 chains in PDB entry 8HAT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	SER 47	ASP 452
D	GLN 90	ASP 452
E	GLN 90	ASP 452
A	SER 47	GLN 455
B	GLN 90	ASP 452
C	GLN 90	ASP 452

There are 38 helices in PDB entry 8HAT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	53	57	Right-handed 310
Helix 2	AA2	F	104	111	Right-handed alpha
Helix 3	AA3	F	232	236	Right-handed 310
Helix 4	AA4	F	327	331	Right-handed 310
Helix 5	AA5	F	431	435	Right-handed 310
Helix 6	AA6	D	93	101	Right-handed alpha
Helix 7	AA7	D	186	193	Right-handed alpha
Helix 8	AA8	D	232	236	Right-handed 310
Helix 9	AA9	D	271	276	Right-handed alpha
Helix 10	AB1	D	328	333	Right-handed alpha
Helix 11	AB2	D	373	377	Right-handed 310
Helix 12	AB3	D	432	438	Right-handed alpha
Helix 13	AB4	D	447	452	Right-handed alpha
Helix 14	AB5	E	93	109	Right-handed alpha
Helix 15	AB6	E	186	192	Right-handed alpha
Helix 16	AB7	E	271	276	Right-handed alpha
Helix 17	AB8	E	327	331	Right-handed 310
Helix 18	AB9	E	434	439	Right-handed alpha
Helix 19	AC1	E	446	450	Right-handed 310
Helix 20	AC2	A	104	111	Right-handed alpha
Helix 21	AC3	A	272	276	Right-handed alpha
Helix 22	AC4	A	302	306	Right-handed 310
Helix 23	AC5	A	327	331	Right-handed 310
Helix 24	AC6	A	446	454	Right-handed alpha
Helix 25	AC7	B	93	99	Right-handed alpha
Helix 26	AC8	B	186	193	Right-handed alpha
Helix 27	AC9	B	232	237	Right-handed alpha
Helix 28	AD1	B	327	331	Right-handed 310
Helix 29	AD2	B	374	377	Right-handed 310
Helix 30	AD3	B	409	412	Right-handed 310
Helix 31	AD4	B	432	437	Right-handed alpha
Helix 32	AD5	B	446	450	Right-handed 310
Helix 33	AD6	C	93	102	Right-handed alpha
Helix 34	AD7	C	141	145	Right-handed 310
Helix 35	AD8	C	186	191	Right-handed alpha
Helix 36	AD9	C	272	277	Right-handed alpha
Helix 37	AE1	C	327	331	Right-handed 310
Helix 38	AE2	C	432	439	Right-handed alpha

There are 35 sheets in PDB entry 8HAT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	115	122	first strand
Strand 2	F	125	134	anti-parallel
Strand 3	F	165	167	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	204	206	first strand
Strand 2	F	211	213	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	227	229	first strand
Strand 2	F	217	220	anti-parallel
Strand 3	F	441	443	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	247	249	first strand
Strand 2	F	257	259	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	267	271	first strand
Strand 2	F	287	292	anti-parallel
Strand 3	F	364	366	parallel
Strand 4	F	356	358	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	401	404	first strand
Strand 2	F	388	391	anti-parallel
Strand 3	F	335	339	anti-parallel
Strand 4	F	345	353	anti-parallel
Strand 5	F	369	373	anti-parallel
Strand 6	F	426	427	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	155	156	first strand
Strand 2	D	162	166	anti-parallel
Strand 3	D	130	133	parallel
Strand 4	D	116	119	anti-parallel
Strand 5	D	347	353	anti-parallel
Strand 6	D	370	372	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	155	156	first strand
Strand 2	D	162	166	anti-parallel
Strand 3	D	130	133	parallel
Strand 4	D	116	119	anti-parallel
Strand 5	D	347	353	anti-parallel
Strand 6	D	336	337	anti-parallel
Strand 7	D	390	391	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	204	206	first strand
Strand 2	D	211	213	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	295	296	first strand
Strand 2	D	227	229	anti-parallel
Strand 3	D	217	220	anti-parallel
Strand 4	D	441	443	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	248	first strand
Strand 2	D	258	259	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	404	405	first strand
Strand 2	D	429	430	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	414	415	first strand
Strand 2	D	424	425	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	122	first strand
Strand 2	E	125	127	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	134	136	first strand
Strand 2	E	167	169	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	216	218	first strand
Strand 2	E	228	230	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	245	246	first strand
Strand 2	E	261	262	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	348	352	first strand
Strand 2	E	369	373	anti-parallel
Strand 3	E	424	431	anti-parallel
Strand 4	E	403	405	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	348	352	first strand
Strand 2	E	369	373	anti-parallel
Strand 3	E	424	431	anti-parallel
Strand 4	E	414	415	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	90	first strand
Strand 2	A	161	162	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	229	first strand
Strand 2	A	217	220	anti-parallel
Strand 3	A	441	443	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	245	249	first strand
Strand 2	A	257	262	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	271	first strand
Strand 2	A	286	292	anti-parallel
Strand 3	A	364	366	parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	371	373	first strand
Strand 2	A	344	350	anti-parallel
Strand 3	A	335	340	anti-parallel
Strand 4	A	388	391	anti-parallel
Strand 5	A	400	404	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	155	first strand
Strand 2	B	163	166	anti-parallel
Strand 3	B	130	133	parallel
Strand 4	B	116	119	anti-parallel
Strand 5	B	347	353	anti-parallel
Strand 6	B	369	372	anti-parallel
Strand 7	B	424	427	anti-parallel
Strand 8	B	414	415	anti-parallel

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There are 9 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	155	first strand
Strand 2	B	163	166	anti-parallel
Strand 3	B	130	133	parallel
Strand 4	B	116	119	anti-parallel
Strand 5	B	347	353	anti-parallel
Strand 6	B	335	337	anti-parallel
Strand 7	B	388	391	anti-parallel
Strand 8	B	403	404	anti-parallel
Strand 9	B	430	431	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	204	206	first strand
Strand 2	B	211	213	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	217	219	first strand
Strand 2	B	227	231	anti-parallel
Strand 3	B	293	296	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	246	247	first strand
Strand 2	B	259	261	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	122	first strand
Strand 2	C	125	126	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	136	first strand
Strand 2	C	167	169	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	246	247	first strand
Strand 2	C	259	261	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	335	339	first strand
Strand 2	C	345	352	anti-parallel
Strand 3	C	370	373	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	391	first strand
Strand 2	C	400	404	anti-parallel
Strand 3	C	430	431	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	414	415	first strand
Strand 2	C	424	425	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HAT

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HAT