Analysis of interatomic Contacts of Structural Units in PDB entry:
8HBS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HBS entry

There is 1 chain in PDB entry 8HBS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 17LEU 409
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8HBS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 64Right-handed alpha
Helix 2
AA2
A
77 86Right-handed alpha
Helix 3
AA3
A
91 93Right-handed 310
Helix 4
AA4
A
136 142Right-handed 310
Helix 5
AA5
A
143 157Right-handed alpha
Helix 6
AA6
A
186 193Right-handed alpha
Helix 7
AA7
A
203 211Right-handed alpha
Helix 8
AA8
A
226 228Right-handed 310
Helix 9
AA9
A
229 242Right-handed alpha
Helix 10
AB1
A
251 260Right-handed alpha
Helix 11
AB2
A
318 322Right-handed 310
Helix 12
AB3
A
323 345Right-handed alpha
Helix 13
AB4
A
357 361Right-handed 310
Helix 14
AB5
A
397 401Right-handed 310
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There are 4 sheets in PDB entry 8HBS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
A
381 382anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 44first strand
Strand 2
A
95 100anti-parallel
Strand 3
A
106 119anti-parallel
Strand 4
A
122 129anti-parallel
Strand 5
A
162 167parallel
Strand 6
A
368 379anti-parallel
Strand 7
A
176 184anti-parallel
Strand 8
A
349 353anti-parallel
Strand 9
A
308 316parallel
Strand 10
A
284 292anti-parallel
Strand 11
A
271 277anti-parallel
Strand 12
A
222 224anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
A
106 119anti-parallel
Strand 3
A
246 249anti-parallel
Strand 4
A
404 405parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
295 297anti-parallel
Strand 3
A
305 306anti-parallel
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