Analysis of interatomic Contacts of Structural Units in PDB entry:
8HCI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HCI entry

There are 4 chains in PDB entry 8HCI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLU 2LEU 269
D
 MET 1HIS 296
A
 GLU 2LEU 269
B
 MET 1HIS 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 8HCI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
3 16Right-handed alpha
Helix 2
AA2
C
17 27Right-handed alpha
Helix 3
AA3
C
37 46Right-handed alpha
Helix 4
AA4
C
50 76Right-handed alpha
Helix 5
AA5
C
77 87Right-handed alpha
Helix 6
AA6
C
90 102Right-handed alpha
Helix 7
AA7
C
110 125Right-handed alpha
Helix 8
AA8
C
126 129Right-handed 310
Helix 9
AA9
C
131 151Right-handed alpha
Helix 10
AB1
C
178 184Right-handed alpha
Helix 11
AB2
C
185 188Right-handed 310
Helix 12
AB3
C
217 227Right-handed alpha
Helix 13
AB4
C
232 241Right-handed alpha
Helix 14
AB5
C
251 262Right-handed alpha
Helix 15
AB6
D
17 24Right-handed alpha
Helix 16
AB7
D
39 41Right-handed 310
Helix 17
AB8
D
52 66Right-handed alpha
Helix 18
AB9
D
82 85Right-handed 310
Helix 19
AC1
D
86 92Right-handed alpha
Helix 20
AC2
D
92 100Right-handed alpha
Helix 21
AC3
D
126 145Right-handed alpha
Helix 22
AC4
D
165 178Right-handed alpha
Helix 23
AC5
D
185 195Right-handed alpha
Helix 24
AC6
D
199 207Right-handed alpha
Helix 25
AC7
D
208 210Right-handed 310
Helix 26
AC8
D
236 250Right-handed alpha
Helix 27
AC9
D
274 293Right-handed alpha
Helix 28
AD1
A
3 17Right-handed alpha
Helix 29
AD2
A
17 27Right-handed alpha
Helix 30
AD3
A
37 47Right-handed alpha
Helix 31
AD4
A
50 77Right-handed alpha
Helix 32
AD5
A
77 87Right-handed alpha
Helix 33
AD6
A
90 102Right-handed alpha
Helix 34
AD7
A
110 125Right-handed alpha
Helix 35
AD8
A
126 129Right-handed 310
Helix 36
AD9
A
131 151Right-handed alpha
Helix 37
AE1
A
178 184Right-handed alpha
Helix 38
AE2
A
185 188Right-handed 310
Helix 39
AE3
A
217 226Right-handed alpha
Helix 40
AE4
A
232 241Right-handed alpha
Helix 41
AE5
A
249 262Right-handed alpha
Helix 42
AE6
B
19 24Right-handed alpha
Helix 43
AE7
B
38 42Right-handed alpha
Helix 44
AE8
B
52 66Right-handed alpha
Helix 45
AE9
B
82 85Right-handed 310
Helix 46
AF1
B
86 92Right-handed alpha
Helix 47
AF2
B
92 100Right-handed alpha
Helix 48
AF3
B
126 145Right-handed alpha
Helix 49
AF4
B
165 178Right-handed alpha
Helix 50
AF5
B
185 195Right-handed alpha
Helix 51
AF6
B
199 207Right-handed alpha
Helix 52
AF7
B
208 210Right-handed 310
Helix 53
AF8
B
236 250Right-handed alpha
Helix 54
AF9
B
274 293Right-handed alpha
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There are 6 sheets in PDB entry 8HCI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
164 165first strand
Strand 2
C
265 266anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 173first strand
Strand 2
C
199 203anti-parallel
Strand 3
C
212 216anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 15first strand
Strand 2
D
33 37parallel
Strand 3
D
67 71parallel
Strand 4
D
104 107parallel
Strand 5
D
148 151parallel
Strand 6
D
180 184parallel
Strand 7
D
212 218parallel
Strand 8
D
254 258parallel
Strand 9
D
11 15parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
265 266anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 173first strand
Strand 2
A
199 203anti-parallel
Strand 3
A
212 216anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 15first strand
Strand 2
B
33 37parallel
Strand 3
B
67 71parallel
Strand 4
B
104 107parallel
Strand 5
B
148 151parallel
Strand 6
B
180 184parallel
Strand 7
B
212 217parallel
Strand 8
B
254 257parallel
Strand 9
B
11 15parallel
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