Analysis of interatomic Contacts of Structural Units in PDB entry:
8HDH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HDH entry

There are 2 chains in PDB entry 8HDH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 21ALA 672
B
 GLN 28GLN 56
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8HDH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 47Right-handed alpha
Helix 2
AA2
A
51 58Right-handed alpha
Helix 3
AA3
A
59 61Right-handed 310
Helix 4
AA4
A
63 76Right-handed alpha
Helix 5
AA5
A
77 92Right-handed alpha
Helix 6
AA6
A
95 112Right-handed alpha
Helix 7
AA7
A
112 121Right-handed alpha
Helix 8
AA8
A
124 134Right-handed alpha
Helix 9
AA9
A
136 154Right-handed alpha
Helix 10
AB1
A
154 170Right-handed alpha
Helix 11
AB2
A
175 192Right-handed alpha
Helix 12
AB3
A
193 224Right-handed alpha
Helix 13
AB4
A
224 233Right-handed alpha
Helix 14
AB5
A
275 293Right-handed alpha
Helix 15
AB6
A
294 303Right-handed alpha
Helix 16
AB7
A
306 321Right-handed alpha
Helix 17
AB8
A
323 328Right-handed alpha
Helix 18
AB9
A
328 339Right-handed alpha
Helix 19
AC1
A
339 344Right-handed alpha
Helix 20
AC2
A
347 356Right-handed alpha
Helix 21
AC3
A
361 363Right-handed 310
Helix 22
AC4
A
364 374Right-handed alpha
Helix 23
AC5
A
377 409Right-handed alpha
Helix 24
AC6
A
409 414Right-handed alpha
Helix 25
AC7
A
420 446Right-handed alpha
Helix 26
AC8
A
450 464Right-handed alpha
Helix 27
AC9
A
464 477Right-handed alpha
Helix 28
AD1
A
481 501Right-handed alpha
Helix 29
AD2
A
501 507Right-handed alpha
Helix 30
AD3
A
518 523Right-handed alpha
Helix 31
AD4
A
525 548Right-handed alpha
Helix 32
AD5
A
552 556Right-handed 310
Helix 33
AD6
A
646 671Right-handed alpha
Helix 34
AD7
B
29 55Right-handed alpha
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There are no sheets in PDB entry 8HDH
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