Analysis of interatomic Contacts of Structural Units in PDB entry:
8HEG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HEG entry

There are 4 chains in PDB entry 8HEG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 25LYS 210
B
 GLU 52GLU 218
C
 GLY 1GLN 221
D
 GLN 1SER 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 8HEG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 36Right-handed alpha
Helix 2
AA2
A
52 56Right-handed 310
Helix 3
AA3
A
60 68Right-handed alpha
Helix 4
AA4
A
94 100Right-handed 310
Helix 5
AA5
B
56 59Right-handed 310
Helix 6
AA6
B
89 97Right-handed alpha
Helix 7
AA7
B
133 143Right-handed 310
Helix 8
AA8
C
43 51Right-handed alpha
Helix 9
AA9
C
84 88Right-handed 310
Helix 10
AB1
C
89 96Right-handed alpha
Helix 11
AB2
C
138 143Right-handed 310
Helix 12
AB3
D
28 32Right-handed 310
Helix 13
AB4
D
87 91Right-handed 310
Back to top of page

There are 13 sheets in PDB entry 8HEG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
171 178anti-parallel
Strand 3
A
76 83anti-parallel
Strand 4
A
113 117anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
166 168anti-parallel
Strand 3
A
86 89anti-parallel
Strand 4
A
105 106anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
69 73anti-parallel
Strand 3
A
183 187anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
209 213anti-parallel
Strand 3
B
98 102anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 69first strand
Strand 2
B
197 199anti-parallel
Strand 3
B
111 112anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 82first strand
Strand 2
B
178 188anti-parallel
Strand 3
B
118 125anti-parallel
Strand 4
B
145 148anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 160first strand
Strand 2
B
105 108anti-parallel
Strand 3
B
202 203anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 54first strand
Strand 2
C
201 206anti-parallel
Strand 3
C
105 110anti-parallel
Strand 4
C
155 160anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 79first strand
Strand 2
C
183 192anti-parallel
Strand 3
C
119 126anti-parallel
Strand 4
C
144 149anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 101first strand
Strand 2
C
169 170anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 7first strand
Strand 2
D
18 25anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
68 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 13first strand
Strand 2
D
116 121parallel
Strand 3
D
92 99anti-parallel
Strand 4
D
33 39anti-parallel
Strand 5
D
45 51anti-parallel
Strand 6
D
59 60anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 13first strand
Strand 2
D
116 121parallel
Strand 3
D
92 99anti-parallel
Strand 4
D
111 112anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il